S.cerevisiae - Yeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

MSA1

Promoter Sequence

Consensus
WTAWTW: -976 -903 -862 -775 -772 -663 -619 -616 -612 -607 -603 -596 -488 -485 -383 -340 -278 -245 -236

>MSA1    upstream sequence, from -1000 to -1, size 1000
TAATAAAAGAAATGAAAAAAAAGAATATTAGTAGAGCATACTGAATTGTTTTCAGAAAGA
GAGTGAAAGGTAACAAAAATTTACCTACTTTTCCTTTTTATTTCTCTGGTTTCGTTTCTT
TTTTTTCGGCCACCCTATTTATTTTTTCACTGCTTGTAAACAACGTCTCACTTCAATAGT
GTCTCCTTCATGTACTGAGATACTGCTGCAAGCGAAATATCACGAATAATAan>ATATAAAAA
AAAAAAAAAAAAAAAAAAAAGATGTTTAAATGTTAACAACCTAACAGCAATAAAAAATAA
AAATAAAGGTAGAAGATTGCAAGAAAGAAACTTTACAATATTTTGTTTGGATGCCCAACA
CCGGCGTCTTGGTGTTCTTCTATAATAan>TTTn>ATTT>TATTTn>ATTTTTTATTTATATATGTAC
ATATATATTCCTATTATCTATTAAGAAAGTAAACTTAGTGTAAATCTACCACTGTTCCAA
GGCTTTGGCCATCCACCTTCTCTTTCGTTCCATTAATAan>ATATGACACAATCGTTGAGGAT
GCGAGCGAGACCGTTATGGTCGATCTTTGAAGTCGCCGCGTAACGCGCTAGTATTTTTTC
CTTAAAGAGGCAAACACTTATTTTTCCCTAATAGGAAATCCCTCAAATCGGTTTTTTTCC
ATATTAGTCCCGTTCTATTGTCTGGTTTCATACCTCTAAAATTTCTCTCGCTGTTCCATC
AATTAATACAATCAAGGCACAGCCAGCAAATACTAATAATTCTCTTAATAACTGCTTCCC
CTTTGCAGCACCGATAAGGGATCTTTAAGACGGTCTTGAAAATTTTTCGTTAGTTCATTT
TTCATTCTCGGAAGTTTTTTTAAATTTTGAGAAGAAGAGCTGGTTGCACATTCCAAGGTG
ATTAAAGGGATTTGATTAAGTATATATTCACCAACCTGGGTTGTGTAGTTGAAAAGGGGA
ATAAAAATATCTCAAGAATACTTCGTGAAAAATATTCACT

Promoter Sequence
Complementary Strand

Consensus
WTAWTW: -5 -30 -229 -241 -274 -478 -481 -556 -563 -612 -694 -700 -765 -768 -780 -994

>MSA1	Upstream Sequence Complementary Strand
ATTATTTTCTTTACTTTTTTTTCTTATAATCATCTCGTATGACTTAACAAAAGTCTTTCT
CTCACTTTCCATTGTTTTTAAATGGATGAAAAGGAAAAATAAAGAGACCAAAGCAAAGAA
AAAAAAGCCGGTGGGATAAATAAAAAAGTGACGAACATTTGTTGCAGAGTGAAGTTATCA
CAGAGGAAGTACATGACTCTATGACGACGTTCGCTTTATAGTGCTTATTATTan>ATATTTTT
TTTTTTTTTTTTTTTTTTTTCTACAAATTTACAATTGTTGGATTGTCGTTATTTTTTATT
TTTATTTCCATCTTCTAACGTTCTTTCTTTGAAATGTTATAAAACAAACCTACGGGTTGT
GGCCGCAGAACCACAAGAAGATATTATAAATAAAATAAATAAAAAATAAATATATACATG
TATATATAAGGATAATAGATAATTCTTTCATTTGAATCACATTTAGATGGTGACAAGGTT
CCGAAACCGGTAGGTGGAAGAGAAAGCAAGGTAATTATTan>ATACTGTGTTAGCAACTCCTA
CGCTCGCTCTGGCAATACCAGCTAGAAACTTCAGCGGCGCATTGCGCGATCATAAAAAAG
GAATTTCTCCGTTTGTGAATAAAAAGGGATTATCCTTTAGGGAGTTTAGCCAAAAAAAGG
TATAATCAGGGCAAGATAACAGACCAAAGTATGGAGATTTTAAAGAGAGCGACAAGGTAG
TTAATTATGTTAGTTCCGTGTCGGTCGTTTATGATTATTAAGAGAATTATTGACGAAGGG
GAAACGTCGTGGCTATTCCCTAGAAATTCTGCCAGAACTTTTAAAAAGCAATCAAGTAAA
AAGTAAGAGCCTTCAAAAAAATTTAAAACTCTTCTTCTCGACCAACGTGTAAGGTTCCAC
TAATTTCCCTAAACTAATTCATATATAAGTGGTTGGACCCAACACATCAACTTTTCCCCT
TATTTTTATAGAGTTCTTATGAAGCACTTTTTATAAGTGA