YEASTRACT - Retrieve flat files

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DISCOVERER New

Regulatory Associations:
- Search for TFs
- Search for Genes
- Search for Associations

Group genes:
- Group by TF
- Group by GO

Pattern Matching:
- Search by DNA Motif
- Find TF Binding Site(s)
- Search Motifs on Motifs

Utilities:
- ORF List ⇔ Gene List
- IUPAC Code Generation
- Generate Regulation Matrix

Retrieve:
- TF-Consensus List
- Upstream Sequence
- Flat files

About Yeastract:
- Contact Us
- Cite YEASTRACT
- Acknowledgments
- Credits

Support & suggestions:

Retrieve flat files

Promoter sequences: promoter_sequences.fasta.gz download [2.1 Mb]
This file contains the promoter sequences of all the genes described in the Yeastract database.

Gene sequences: gene_sequences.fasta.gz download [2.8 Mb]
This file contains the genomic sequences of all the genes described in the Yeastract database.

Aminoacid sequences: aminoacid_sequences.fasta.gz download [1.8 Mb]
This file contains the aminoacid sequences of all the proteins described in the Yeastract database.

Documented Regulations:
RegulationMatrix_Documented_20080820.csv.gz download [68 Kb]
RegulationTwoColumnTable_Documented_20081225.tsv.gz [112 Kb]
These files contain the documented regulations between all transcription factors and genes described in the Yeastract database.

Transcription factor consensus list (TRANSFAC format): TFConsensusList_20080607.transfac.gz download [8 Kb]
This file contains the transcription factor consensus list, in the TRANSFAC format, described in the Yeastract database.

If you would like to receive other data that is not available here, please Contact Us.