S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Swi5p	YLR079W	PubMed Knapp D et al., Mol Cell Biol, 1996 Oct;16(10):5701-7	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YEP 2% raffinose
		PubMed Toyn JH et al., Genetics, 1997 Jan;145(1):85-96	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	5h growth after 2% galactose was added to log phase cultures growing in YP raffinose in a CLB2-overexpressing strain (cells arrested at telophase)
		PubMed Aerne BL et al., Mol Biol Cell, 1998 Apr;9(4):945-56	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed McBride HJ et al., J Biol Chem, 1999 Jul 23;274(30):21029-36	Direct	DNA footprinting	Positive	W303	Exponential-phase cells cultivated in synthetic growth medium
		PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Exponential phase cells cultivated in YPD growth medium (40 minutes after cell-cycle synchronization)
		PubMed Simon I et al., Cell, 2001 Sep 21;106(6):697-708	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Voth WP et al., EMBO J, 2007 Oct 17;26(20):4324-34	Direct	ChIP	N/A	S288c	N/A
		PubMed Cocklin R et al., Genetics, 2011 Mar;187(3):701-15	Indirect	Western blot - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C