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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Sok2p
|
YNL160W
|
PubMed
Horak CE et al., Genes Dev, 2002 Dec 1;16(23):3017-33Horak CE et al., Genes Dev, 2002 Dec 1;16(23):3017-33 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Váchová L et al., J Biol Chem, 2004 Sep 3;279(36):37973-81Váchová L et al., J Biol Chem, 2004 Sep 3;279(36):37973-81 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4742 |
Microarrays performed with sok2 deletion mutant colonies grown (13 days) in GM-agar (GM - 1% yeast extract, 3% glycerol, 2% agar, 30 mM CaCl2). |
PubMed
Borneman AR et al., Genes Dev, 2006 Feb 15;20(4):435-48Borneman AR et al., Genes Dev, 2006 Feb 15;20(4):435-48 |
Direct |
Chip-on-chip |
N/A |
S288c |
Low nitrogen (SLAD) medium |
PubMed
Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
N/A |
Cells grown in synthetic medium supplemented with 2% dextrose |
PubMed
Borneman AR et al., Funct Integr Genomics, 2007 Oct;7(4):335-45Borneman AR et al., Funct Integr Genomics, 2007 Oct;7(4):335-45 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
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