S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rox1p	YEL039C	PubMed Lowry CV et al., Mol Cell Biol, 1990 Nov;10(11):5921-6	Direct	lacZ - wt vs mutant promoter sequence	Negative	S288c	YPD medium; mid-log phase
		PubMed Lowry CV et al., Mol Cell Biol, 1988 Nov;8(11):4651-8	Indirect	Northern blot - wt vs TF mutant	Negative	S288c	aerobic growth to mid-log phase; synthetic medium
		PubMed Kwast KE et al., Curr Genet, 1997 Dec;32(6):377-83	Indirect	Northern blot - wt vs TF mutant	Negative	S288c	Semi Synthetic galactose (10g/L) medium with 0.1% Tween 80 (v/v), 20 mg of ergosterol, 350 ppm of silicone antifoam (per liter) - SSG-TEA
		PubMed Kwast KE et al., J Bacteriol, 2002 Jan;184(1):250-65	Indirect	Microarray analysis - wt vs TF mutant	Negative	JM43 / RZ53-6	Aerobiosis; cells grown in SSG-TEA (10 g/L galactose, 0.1% Tween 80, 20 mg/L ergosterol, 350 ppm silicone antifoam) or YPGalactose medium
		PubMed Becerra M et al., Mol Microbiol, 2002 Feb;43(3):545-55	Indirect	Microarray analysis - wt vs TF mutant	Negative	aGH1	Cells grown in complete medium with 0.5% glucose in aerobic conditions
		PubMed Ter Linde JJ et al., Yeast, 2002 Jul;19(10):825-40	Indirect	Microarray analysis - wt vs TF mutant	Negative	CEN.PK113-7D	Steady-state chemostat cultures aerobically grown on mineral mediium containing 7.5 g/L glucose (growth-limiting nutrient)
		PubMed Liu J et al., Antioxid Redox Signal, 2013 Dec 1;19(16):1916-27	Direct	ChIP	N/A	S288c	YPD medium + H2O2
			Direct	ChIP	N/A	S288c	YPD medium + menadione