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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Rox1p YDR044W PubMed external link Keng T, Mol Cell Biol, 1992 Jun;12(6):2616-23Keng T, Mol Cell Biol, 1992 Jun;12(6):2616-23 Indirect Northern blot - wt vs TF overexpression Negative S288c in Δhem1Δhap1 cells, supplemented with δ-ALA (heme-sufficient and aerobic conditions)
PubMed external link Lowry CV et al., Mol Cell Biol, 1990 Nov;10(11):5921-6Lowry CV et al., Mol Cell Biol, 1990 Nov;10(11):5921-6 Direct lacZ - wt vs mutant promoter sequence Negative S288c YPD medium; mid-log phase
PubMed external link Deckert J et al., Mol Cell Biol, 1995 Nov;15(11):6109-17Deckert J et al., Mol Cell Biol, 1995 Nov;15(11):6109-17 Indirect Northern blot - wt vs TF mutant N/A S288c N/A
PubMed external link Amillet JM et al., Curr Genet, 1995 Nov;28(6):503-11Amillet JM et al., Curr Genet, 1995 Nov;28(6):503-11 Direct lacZ - wt vs mutant promoter sequence Positive S288c Anaerobiosis
PubMed external link Amillet JM et al., J Biol Chem, 1996 Oct 4;271(40):24425-32Amillet JM et al., J Biol Chem, 1996 Oct 4;271(40):24425-32 Direct lacZ - wt vs mutant promoter sequence Negative S288c log-phase cells grown in Synthetic glucose minimal medium (SD) in aerobiosis
PubMed external link Kwast KE et al., Curr Genet, 1997 Dec;32(6):377-83Kwast KE et al., Curr Genet, 1997 Dec;32(6):377-83 Indirect Northern blot - wt vs TF mutant Negative S288c Semi Synthetic galactose (10g/L) medium with 0.1% Tween 80 (v/v), 20 mg of ergosterol, 350 ppm of silicone antifoam (per liter) - SSG-TEA
PubMed external link Abramova NE et al., Genetics, 2001 Mar;157(3):1169-77Abramova NE et al., Genetics, 2001 Mar;157(3):1169-77 Indirect Northern blot - wt vs TF mutant Negative FY23 Exponential-phase cells grown in YPD medium under aerobic conditions
PubMed external link Kwast KE et al., J Bacteriol, 2002 Jan;184(1):250-65Kwast KE et al., J Bacteriol, 2002 Jan;184(1):250-65 Indirect Microarray analysis - wt vs TF mutant Negative JM43 Aerobiosis; cells grown in SSG-TEA medium (10 g/L galactose, 0.1% Tween 80, 20 mg/L ergosterol, 350 ppm silicone antifoam)
Indirect Microarray analysis - wt vs TF mutant Negative JM43 Aerobiosis; cells grown in YPGalactose medium
PubMed external link Ter Linde JJ et al., Yeast, 2002 Jul;19(10):825-40Ter Linde JJ et al., Yeast, 2002 Jul;19(10):825-40 Indirect Microarray analysis - wt vs TF mutant Negative CEN.PK113-7D Steady-state chemostat cultures aerobically grown on mineral mediium containing 7.5 g/L glucose (growth-limiting nutrient)
PubMed external link Mennella TA et al., Eukaryot Cell, 2003 Dec;2(6):1288-303Mennella TA et al., Eukaryot Cell, 2003 Dec;2(6):1288-303 Direct ChIP N/A S288c Hypoxia
PubMed external link Klinkenberg LG et al., Eukaryot Cell, 2005 Apr;4(4):649-60Klinkenberg LG et al., Eukaryot Cell, 2005 Apr;4(4):649-60 Direct EMSA N/A S288c in vitro
PubMed external link Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488 Indirect Microarray analysis - wt vs TF mutant Positive BY4741 YPD 30.C 0.1 mM H2O2
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Negative S288c YPD medium; mid-log phase
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