The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Msn4p
|
YOL052C-A
|
PubMed
MartÃnez-Pastor MT et al., EMBO J, 1996 May 1;15(9):2227-35MartÃnez-Pastor MT et al., EMBO J, 1996 May 1;15(9):2227-35 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
7% ethanol 20min |
PubMed
Schmitt AP et al., Proc Natl Acad Sci U S A, 1996 Jun 11;93(12):5777-82Schmitt AP et al., Proc Natl Acad Sci U S A, 1996 Jun 11;93(12):5777-82 |
Indirect |
Northern blot - wt vs TF overexpression |
Positive |
S288c |
YPD 20min 37ºC |
PubMed
Rep M et al., J Biol Chem, 2000 Mar 24;275(12):8290-300Rep M et al., J Biol Chem, 2000 Mar 24;275(12):8290-300 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD + 0,5M NaCl |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
SSGal-TEA medium + anaerobiosis (2 generations) |
PubMed
Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 |
YPD+0.7 M NaCl 45min |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 |
YPD e 30-37.C heat shock 15min |
PubMed
Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium containing 0,8M glucose (glucose "osmotic" stress) |
PubMed
Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4741 |
YPD 30.C from 0.1 mM H2O2 to 0.4 mM H2O2 |
PubMed
Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938 |
Direct |
ChIP-seq |
N/A |
BY5764 |
YPD 30.C |
|