S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Msn2p	YOR374W	PubMed Aranda A et al., Yeast, 2003 Jun;20(8):747-59	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Acetaldehyde stress; Exponential-phase cells cultivated for 1 h in YPD supplemented with 1 g/L acetaldehyde
		PubMed Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)
		PubMed Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	YPD+0.7 M NaCl 45min
		PubMed Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;():	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium + 0,4M KCl (salt stress)
		PubMed Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	YPD 30.C 0.1 mM H2O2
		PubMed Stewart-Ornstein J et al., Curr Biol, 2013 Dec 2;23(23):2336-45	Indirect	GFP - wt vs TF overexpression	Positive	S288c	Estradiol induced
		PubMed Elfving N et al., Nucleic Acids Res, 2014 May;42(9):5468-82	Indirect	Microarray analysis - wt vs TF overexpression	Positive	S288c	SD + glucose + estradiol induction
		PubMed Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938	Direct	ChIP-seq	N/A	BY5764	YPD 30.C
		PubMed Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	YPD 30.C
		PubMed Vamvakas SS et al., Biotechnol Prog, 2019 Mar;35(2):e2759	Indirect	RT-PCR - wt vs TF mutant	N/A	W303-1A	complete synthetic medium at 30.C, 6% v/v alcohol, aerobic growth