S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Haa1p	YNL160W	PubMed Keller G et al., J Biol Chem, 2001 Oct 19;276(42):38697-702	Direct	DNA footprinting	Positive	CM66J	Cells grown in SC medium before induction of pGAL1-HAA1 with 2% galactose
			Direct	DNA footprinting	Positive	CM66J	Cells grown to log phase in SC medium
			Indirect	Microarray analysis - wt vs TF mutant	Positive	CM66J	Cells grown to log phase in SC medium supplemented with 100 microM BCS or 100 microM CuSO4
		PubMed Fernandes AR et al., Biochem Biophys Res Commun, 2005 Nov 11;337(1):95-103	Indirect	Western blot - wt vs TF mutant	Positive	S288c	20 mM propionic acid (45 min)
		PubMed Mira NP et al., OMICS, 2010 Oct;14(5):587-601	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	Cells cultivated for 30 min in MM4 growth medium (pH 4.0) supplemented with 50 mM acetic acid
		PubMed Tanaka K et al., Appl Environ Microbiol, 2012 Nov;78(22):8161-3	Indirect	RT-PCR - wt vs TF overexpression (altered promoter sequence)	Positive	S288c	logarithmically growing cells
		PubMed Sugiyama M et al., Appl Environ Microbiol, 2014 Jun;80(11):3488-95	Indirect	RT-PCR - wt vs TF overexpression	Positive	BY4741	Strains incubated in YPD medium containing 4% lactic acid (pH 2.8) for 30 min
		PubMed Sakihama Y et al., J Biosci Bioeng, 2015 Mar;119(3):297-302	Direct	RT-PCR - wt vs mutant promoter sequence	Positive	S288c	acetic acid
		PubMed Swinnen S et al., Microb Cell Fact, 2017 Jan 9;16(1):7	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Growth in synthetic medium + 50 mM acetic acid (pH 4.5)
		PubMed Palma M et al., BMC Genomics, 2017 Jan 13;18(1):75	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	log-phase growth; MM4 pH 4.0
			Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	60 mM acetic acid (1H)
			Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	60 mM acetic acid (2H)