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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Fkh1p
|
YGR108W
|
PubMed
Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303 |
15, 30, 45, 60 min after release of G1 phase synchronization |
PubMed
Knott SR et al., Cell, 2012;():Knott SR et al., Cell, 2012;(): |
Direct |
ChIP-seq |
Negative |
S288c |
G1-phase arrested cells |
PubMed
Ostrow AZ et al., PLoS One, 2014;9(2):e87647Ostrow AZ et al., PLoS One, 2014;9(2):e87647 |
Direct |
Chip-on-chip |
N/A |
S288c |
Unspecified medium, 23.C, synchronized with alpha-factor, hydroxyurea or nocodazole |
PubMed
Linke C et al., NPJ Syst Biol Appl, 2017 Mar 6;3(1):Linke C et al., NPJ Syst Biol Appl, 2017 Mar 6;3(1): |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 fkh1DELTA |
BY4741 fkh1DELTA; yeast cells treated with 5 microg/ml NOCODAZOLE; YPD medium; 30.C |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 fkh1DELTAfkh2DELTA |
BY4741 fkh1DELTAfkh2DELTA; yeast cells treated with 5 microg/ml NOCODAZOLE; YPD medium; 30.C |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
BY4741 fkh1DELTA |
BY4741 fkh1DELTA; yeast cells treated with 75 mM Hydroxyurea; YPD medium; 30.C |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 fkh1DELTAfkh2DELTA |
BY4741 fkh1DELTAfkh2DELTA; yeast cells treated with 75 mM Hydroxyurea; YPD medium; 30.C |
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