The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Aft1p
|
YMR319C
|
PubMed
Jensen LT et al., J Mol Biol, 2002 Apr 26;318(2):251-60Jensen LT et al., J Mol Biol, 2002 Apr 26;318(2):251-60 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
low iron minimal medium (SD-LF) supplemented with the iron chelator BPS in aerobiosis |
PubMed
Waters BM et al., J Biol Chem, 2002 Sep 13;277(37):33749-57Waters BM et al., J Biol Chem, 2002 Sep 13;277(37):33749-57 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
BY4743 |
Iron deficiency; cells grown aerobically to mid-log phase in CSD medium |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Dubacq C et al., Mol Genet Genomics, 2006 Feb;275(2):114-24Dubacq C et al., Mol Genet Genomics, 2006 Feb;275(2):114-24 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium + 200mM hydroxyurea |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Jaehnig EJ et al., Cell Rep, 2013 Jul 11;4(1):174-88Jaehnig EJ et al., Cell Rep, 2013 Jul 11;4(1):174-88 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
N/A |
|