Yeastract
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YEASTRACT+ INESC-ID IST IBB
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Locus Information

Standard Name EDC3
Systematic Name YEL015W
Alias DCP3, LSM16
Strain S288c
Description Non-essential conserved protein with a role in mRNA decapping; specifically affects the function of the decapping enzyme Dcp1p; mediates decay of the RPS28B mRNA via binding to both Rps28Bp (or Rps28Ap) and the RPS28B mRNA; mediates decay of the YRA1 mRNA by a different, translation-independent mechanism; localizes to cytoplasmic mRNA processing bodies; forms cytoplasmic foci upon DNA replication stress
External sources Open in SGD external link
Open in KEGG external link
Gene Sequence
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>EDC3 YEL015W
ATGTCACAATTTGTTGGTTTCGGAGTACAAGTGGAGCTAAAAGATGGGAAGCTCATTCAG
GGGAAAATTGCCAAAGCAACCTCAAAAGGATTGACTTTAAATGACGTTCAATTCGGCGAT
GGTGGTAAATCTCAAGCTTTCAAAGTGAGGGCGTCAAGGCTAAAGGACTTAAAGGTTCTA
ACTGTTGCCTCTCAATCCGGGAAAAGGAAGCAGCAAAGACAACAGCAGCAACAAAACGAT
TATAATCAAAATCGCGGTGAACATATTGATTGGCAAGATGATGATGTTAGTAAGATAAAA
CAACAGGAAGATTTCGATTTCCAAAGAAATTTGGGCATGTTTAACAAAAAAGACGTCTTC
GCACAATTAAAGCAAAATGACGATATATTACCGGAGAATAGATTACAGGGACATAACAGA
AAGCAAACCCAATTGCAGCAAAATAATTATCAAAATGATGAATTGGTTATTCCAGATGCA
AAGAAAGATTCATGGAACAAGATTTCTTCAAGAAATGAGCAAAGCACACACCAATCTCAG
CCGCAACAAGATGCTCAAGATGATCTGGTTTTGGAAGATGATGAACATGAATACGATGTC
GATGATATCGATGATCCCAAATACCTACCAATAACTCAGTCTTTGAATATTACACATTTA
ATTCACTCTGCAACTAACTCTCCATCCATAAATGATAAAACGAAAGGTACAGTTATAAAT
GATAAGGATCAGGTACTAGCTAAATTAGGCCAGATGATCATCAGCCAGTCAAGATCCAAC
TCAACATCCTTGCCAGCTGCAAATAAACAAACAACCATCAGATCAAAGAACACTAAGCAG
AACATTCCTATGGCTACACCAGTACAACTACTAGAAATGGAGAGCATCACGTCCGAATTT
TTCAGTATTAACTCGGCAGGGCTACTAGAAAATTTTGCTGTAAACGCATCGTTCTTCTTA
AAGCAGAAACTAGGTGGCCGTGCACGTTTACGTTTACAAAATTCTAATCCGGAACCTTTA
GTAGTAATACTAGCCTCAGATTCCAACAGATCTGGTGCGAAAGCTCTGGCGTTGGGTAGA
CATCTTTGCCAAACGGGGCATATCCGTGTCATAACATTATTTACATGTTCTCAAAATGAA
CTACAGGATTCCATGGTCAAAAAGCAAACAGATATTTACAAGAAGTGTGGCGGAAAAATT
GTTAATAGTGTATCGTCGCTGGAATCTGCTATGGAAACATTAAATAGCCCTGTAGAAATA
GTCATCGATGCCATGCAGGGATATGACTGTACATTGAGCGATCTGGCGGGGACGTCGGAA
GTTATTGAAAGCAGAATTAAAAGCATGATATCATGGTGTAACAAACAGCGAGGATCTACT
AAAGTGTGGTCTTTGGATATTCCAAATGGGTTTGATGCGGGATCCGGCATGCCAGATATT
TTCTTTTCAGACAGGATTGAAGCAACAGGAATTATTTGTTCTGGCTGGCCTTTGATTGCC
ATCAACAACTTAATTGCAAATTTGCCAAGTCTAGAAGATGCTGTTTTGATTGATATAGGT
ATACCACAGGGCGCCTATTCACAGAGAACTTCTTTGCGTAAGTTCCAAAACTGTGATCTT
TTCGTCACTGACGGGTCCCTGCTATTAGATTTGTAA
Promoter Sequence
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>EDC3 YEL015W
CCAGGCCACATATGCGTGGCCACTTTATATTCGCCTTGCGATTCAGTTTGCAGTAGTTGC
CAAATAGGGTCAGCCGTGTTGCTCCAAATTCTTGCGTCGAGGTTATTTGGTCTAAATTCG
CTACTCGTGAAATTATCCCAGAATATATTGGAAACAATACCGTGCTCAATGGGATATTTT
CCCGTTACCATGCTCCAGTGGTTGGGAAATGTCTGAGTGGGAAAACTTGGGATCATATAC
GGTGCAGTCGTGATATTCATATCGTACGGGGACCGCAAATTGTGCAAGTTGTAAAGAAAT
GGCGTGTATTTTGCATCTATCAATCTCGGATGGAACCCATCGATAGATATCAATATCGTT
AACGTCTTGAAATCATGTGTGCCGTTGAAGTAAGTATTTGATCTATTCGCAATTGTCCGG
GGCCCATTATCAATAGGTTTTGGGCACTTCGAATATAAAAGCAACTCAATGAGTATTATA
CCGCAAAGCAAAAGTTTCAATAAAAAATGTCGTGATATTGCGAAAGGTTTTATGTTCGTA
TCATCTTCATTATTTTTTTCAAGGTCAACAGGTTGCTCGAAAAGAAGCATATCGTAAGCA
CACTTCGAAATGGCCTTCTTTGTTATTTCGAAACTGTTTTGTGGCCTGCGTGTTTAATGA
ACCCTGGTATCAAGCGTCACAGTCATATAAAGCCTTAAATTATCTTCCATCAACGCACAG
TAAACCGTCTAATTGATAGAAAAACTCTCAACCCAGTTATCGAGTGTCGCTACACTCTAT
TGTAATTAGCTGCAATCATCTTGTTTATTAATTATGTCATTTTATTACCCTGGATTTGAA
GCCCGTCTCTTTTTCCGCTTGTTTTTTTTTTTTCAATCGCTGAGAAATAGAAAGAAAACA
TAGTTAGCTCGAATAGTTTAGTCAAAAGGCCTACTATTGACTGCTTTTTCTGCAAATCCA
TGCTCTCAAGACAATACAGTAATTCGTAAAAGAAACCATA
Chr coordinates Chr V from 126629-128284
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