Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
CLF1
Systematic Name
YLR117C
Alias
NTC77, SYF3
Strain
S288c
Description
Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; homolog of Drosophila crooked neck protein; interacts with U1 snRNP proteins
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>CLF1 YLR117C
ATGGACACTTTAGAGCCAACAGCCGTTGATACGCATGTTTCTGCGGAGCAGATTCTGCGG
GATGTGTACAAGAAGGGGCAAAAAGCAAGAGGATCGACTAATATTGATATATTAGACTTG
GAGGAACTTCGAGAGTATCAACGAAGGAAGAGAACAGAATATGAGGGTTATTTGAAGAGA
AACCGACTGGATATGGGACAATGGATTCGTTATGCGCAATTCGAAATCGAACAACACGAC
ATGAGGCGCGCCAGATCTATCTTTGAAAGAGCATTATTAGTAGATAGTTCATTCATCCCC
CTTTGGATACGATACATTGATGCTGAGCTGAAAGTCAAATGTATTAACCATGCTAGGAAT
CTTATGAACAGAGCTATTAGTACGTTGCCCAGAGTAGACAAGTTATGGTACAAGTATCTC
ATTGTCGAAGAGTCGTTAAACAACGTTGAAATTGTACGATCACTGTACACCAAATGGTGC
TCCTTGGAGCCAGGGGTTAATGCATGGAATTCTTTCGTGGATTTTGAAATAAGACAGAAA
AACTGGAACGGTGTAAGAGAGATTTACTCAAAATACGTCATGGCTCACCCGCAAATGCAG
ACATGGCTAAAGTGGGTGAGGTTTGAAAATAGACATGGTAATACTGAATTTACGAGAAGT
GTGTATTCTTTAGCGATAGACACAGTAGCTAACCTCCAAAATTTACAGATTTGGTCTGAT
ATGGAGGTTGCAAAATTAGTAAATTCATTTGCTCATTGGGAAGCTGCGCAGCAAGAATAC
GAAAGATCTAGTGCTCTTTATCAAATTGCTATAGAAAAATGGCCCTCCAATCAATTGCTC
AAGGCAGGACTGTTGGATTTTGAAAAGCAGTTTGGTGACATAAACTCAATAGAAGAAACT
ATTAGCTATAAAAGGAAAATGGAGTATGAAACAATATTGAGTAATAACGCCTATGATTAT
GACACCTGGTGGCTGTACTTGGATCTCATTTCAGAAAGTTTCCCCAAACAAATAATGCAA
ACTTTCGAGAAAGCTATTGTGGACAGCCGACCAAAAGAACTATCAAAAAATGTTCAGTGG
AAAAGGTATATTTATCTGTGGATGAGATATATATGCTATGTTGAGTTAGAATTGGAAAAT
TCGCTTTTAGAAGAAGAACTTTTTCAGAGGTTAATTGACGACATCATCCCTCATAAACAT
TTCACTTTTTCCAAAATATGGCTAATGTATGCTAAATTTCTGATACGACATGATGATGTA
CCGAAGGCGAGAAAAATTTTGGGTAAAGCAATCGGTTTATGTCCTAAGGCTAAAACTTTC
AAAGGATATATCGAGTTGGAAGTGAAGTTGAAGGAATTTGATCGTGTGAGAAAAATATAT
GAGAAATTTATTGAATTTCAGCCCTCTGATCTACAAATTTGGTCACAATATGGAGAACTA
GAAGAAAATTTAGGAGATTGGGATAGAGTAAGAGGTATATATACAATTGCACTAGATGAA
AATTCTGATTTCTTAACAAAGGAGGCTAAAATTGTATTACTTCAAAAATACATAACATTT
GAGACAGAATCACAAGAATTTGAAAAGGCAAGGAAGCTTTATAGAAGATATTTGGAGCTC
AACCAATATTCCCCCCAAAGCTGGATCGAATTCGCCATGTATCAAACTTCAACCCCGACG
GAGCAACAACTATTAGATTTAGCAAAACTGCAAAGCGAAAATGTGGATGAAGACATAGAG
TTTGAAATTACCGATGAGAATAAATTGGAGGCAAGAAAAGTTTTTGAAGAGGCGATAGTT
TTTTTCAAGGAGAAGGATGATAAACAAGGGAGACTGTCTATTTTGGAAGCGCTAAAAGAC
TATGAAGAAACTTACGGTACTGAACTCGATCAAGAAACCGTCAAGAAAAGATTCCCTAAA
GTAATCAAAAAAGTGAGGTTACAGAACGGTGTGGAAGAAGAATTCGTGGATTACATTTTT
CCTGATGATATCGATGATGACAAGCCAAAACCATCAAAGTTCTTGGAACTAGCCAAAAAA
TGGAAACAGGAACAGGCACTTTGA
Promoter Sequence
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>CLF1 YLR117C
TATTTCCTTCTTTTCAGAACGCCTATTCTAGGGAAAAATGGCTTCTGTATGAAATAAAAA
TGTTAGCAAAAGAGAACGAAAATAAGAACACATACACTATATTTGCCCATTTGAGCGCTA
TCGAATATGAATGGACTTAGAGTTGCAGCAAAAATTCAGCCAGCACGCCAAACTATCATA
TTCTTGCATGGATTAGGTGATACAGGTTCGGGATGGGGATTTTTAGCTCAGTATTTACAA
CAGAGAGACCCTGCCGCTTTCCAGCATACTAATTTTGTTTTTCCTAATGCTCCAGAGCTT
CATGTGACAGCAAACGGCGGTGCATTGATGCCTGCTTGGTTTGACATCTTGGAATGGGAT
CCTAGTTTTTCCAAAGTTGACAGTGACGGTTTTATGAATTCTTTGAATTCCATAGAAAAG
ACGGTTAAGCAAGAAATTGATAAAGGAATTAAACCGGAGCAGATTATTATCGGAGGTTTC
TCTCAGGGTGCCGCATTAGCTCTCGCAACATCAGTTACTTTACCATGGAAAATCGGTGGT
ATAGTAGCTCTGTCGGGATTTTGTTCCATCCCAGGAATTCTGAAACAACATAAGAATGGC
ATTAATGTAAAGACACCAATTTTTCATGGGCATGGTGACATGGATCCAGTAGTTCCTATT
GGACTAGGTATAAAGGCAAAACAGTTCTATCAAGATAGCTGTGAGATACAAAATTATGAA
TTTAAAGTATACAAAGGTATGGCCCATTCTACAGTTCCAGATGAATTAGAAGACTTGGCT
TCATTTATCAAGAAGAGCTTATCATCATAGCTCTTTTCCTAATATTGCGAGTTCAATTTA
ACCGCTATTATACTTGGTTAAATAATTTATATACATCCGTAAGACGCGATAGAAAATTAA
AAACCTTGGTGCCAAATAGTTGGGGTGATGAGACTCATTGATTATGCAAGTTCATAATAG
ATAGACAAACTTGAGCTAAAAGTACTCTACTATTGCCAGC
Chr coordinates
Chr XII from 384534-382471