Yeastract
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YEASTRACT+ INESC-ID IST IBB
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Locus Information

Standard Name VPS53
Systematic Name YJL029C
Strain S288c
Description Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; required for vacuolar protein sorting; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p; human ortholog is implicated in progressive cerebello-cerebral atrophy type 2 (PCCA2)
External sources Open in SGD external link
Open in KEGG external link
Gene Sequence
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>VPS53 YJL029C
ATGCTGGAAGGTACGGTAGATTATGACCCGCTGGAAGATATTACCAATATACTTTTTTCA
AAAGAATCCCTGAACAACATAGATGAACTGATCAGTATTACCAGAAGCTACAAAAAGCAA
TTGCAAGAGGATATTCTCAAAGAAGAGAATGAATTGAAGGAACACCCTAAAAATTCCGCT
GAAATAGAGGCTTCTCTGAGGAAAGTTTTCCAAGATTTCAAAGAAACTCAAGATGTCTCA
GCCTCCACCGAGTTGACGATATCGAATCTGACAGAAGGTATCTCGTACCTGGACATTGCC
AAGAAAAACCTCACCCACTCTTTGACTCTTTTCCAAAATTTAAAGATATTGACAGACAGT
TACATACAATGCAATGAATTACTCTCACAGGGCTCATTCAAAAAAATGGTGTCCCCTTAT
AAGATAATGTGTTCGCTTGCTGAAAACACATTCATCTCTTACAAATCATTGGACGAGATA
AACTATTTGTTGAGCTCCATTTCAAGACTGAAAGGAGACACTTTGTCCAAAATTAAACAA
AACTACAATGCGCTCTTTTCCGGCGGCAATATCTCAGAGCATGATACAGCACTCACTATG
GAATTGCGCGAAGGTGCCTGCGAGCTACTCGACTGCGATACAAGTACGAGAGCCCAGATG
ATAGATTGGTGTTTGGACAAACTTCTCTTCGAAATGAAAGAGATATTTAGGGTCGACGAT
GAAGCCGGATCCCTAGAAAATTTATCGAGAAGATACATTTACTTCAAAAAAATTCTTAAT
AACTTCAATTCAAAGTTCGCAGACTATTTCTTAAAAGACTGGGAAATGGCAGTCAGATTG
ACCACCACTTTTTATCACATTACACACAAGGACCTTCAGACACTTCTGAAAAGGGAATTC
AAAGACAAGAACCCTTCCATTGATCTATTCATGACAGCATTACAATCGACGCTAGATTTC
GAAAAATACATCGACGTACGATTTTCAAAAAAAATTAAGGAACCAAAACTAAGTTCCTGC
TTCGAACCTTATTTGACTTTATGGGTGTCTCACCAAAACCAAATGATGGAAAAGAAATTT
CTTTCTTATATGAGTGAGCCGAAGTACCCATCTAATGAAACAGAATCTCTCGTGTTACCC
TCGAGTGCAGACCTTTTCAGGACATATCGTTCCGTACTGACTCAGACCTTAGAGCTCATT
GATAATAATGCCAATGATAGCATATTGACTTCATTGGCAAATTTTTTCAGTAGATGGCTT
CAAACTTACTCACAAAAAATTCTTCTTCCTTTACTGCTGCCCGACAATATTGAAGTCCAG
GATAAGCTAGAAGCTGCCAAGTATACCGTTTTATTGATCAATACTGCAGATTATTGTGCC
ACGACTATAGATCAATTGGAGGATAAATTATCTGAATTCAGCGGTAATCGTGAAAAGCTG
GCAAACAGTTTTACGAAAACGAAAAATATATACGACGATTTACTAGCAAAAGGAACTTCT
TTTCTATTAAACCGTGTCATACCCTTAGATCTAAATTTTGTATGGAGAGAGTTTATCAAC
AATGATTGGTCAAATGCTGCGATAGAAGATTATAGCAGGTACATGGTAACCCTCAAATCC
GTACTTAAAATGCCCGCATTAACAGATGCCTCTATTAAACAACAGCAAGAGCAACCTTCG
ACTTTGGCATTTATTTTGTCGCAATTCAATAGAGATGTTTATAAGTGGAATTTCTTGGAT
AAGGTGATTGATATCATCACTACAAATTTTGTAAGCAATACCATCCGCCTTCTGCAGCCC
GTTCCACCCTTTTCCCTGGCGGGCAGCAAAAGGAAATTTGAAACCAGAACTGTTGTCAAC
ATTGGCGAGCAGCTTCTCCTTGATTTAGAATTGCTGAAGGAGATTTTTCACACTTTACCA
GAAAGTGTAAGTAACGATTCTGACTTGCGAGAAAATACCTCTTATAAGAGGGTGAAAAGA
CATGCAGACAATAATATAGACCAGCTGCTGAAGTTTATTAAACTTCTAATGGCTCCTCTG
GATTCCGCTGATGACTATTACGAGACCTACTCCAAATTGACCAATAATAACCCTGATTCA
GCGGTATGGTCTTTTGTCCTCGCTTTAAAGGGCATTCCATGGGACCTGGCATTATGGAAA
AAGCTATGGAGTGCCTACAACTTAGAAACAGACGACACTGACGAGGGCAGCAGGCCAGAC
AGTAATCGCGATCTTTTCATATTCAAGTGGGACAAGGTACTTTTGGGTCAATTTGAAAAC
AACTTGGCAAGGATGCAAGATCCGAATTGGTCAAAATTTGTGAGGCAAGATCTGAAAATA
TCACCACCTGTTATGAAGAGGATAGTATCCACCCCTCAAATACAACAACAAAAAGAAGAA
CAAAAAAAGCAAAGTTTGAGTGTCAAAGACTTCGTTTCTCACTCAAGGTTCTTTAACAGA
GGCACTTGA
Promoter Sequence
Download FASTA
>VPS53 YJL029C
AGATCGCGCGATGTCAAGTAAATAAGCTTGTATTTGTATTTGTATGTGTTTATGTGTTTG
TGTGGTTGAGAATTTTATTTTCCTCCTAGTTTTTTCTTTTTTGAGTGCGGAGGGGCAGTG
CTCTAAACTTTGCCTGCTTCTTGTTCGACTTCGGCTTCCTATGCAGAACGCAAAATCGCG
TGCGCGAGGAACGAGGAAGACAACGCTTTAGATTGGCTTTTTCGTCGCCCATGCCCGTTG
CGATAGCGATATGATGAGAAATCGATAAAAGGTTGCACCAGTACACCGCACTTTCTGGCG
TGCTTGGATCTGGCTTGCGCGGCCTCGTGCCAGTAAGTAGAAAAGTAGTAATATGGCATG
GCGAAAGAGAACAAAACAAGCAAAGCAAGCGTAATGCACAGCTGTGGCTAAAAAAAGAGC
ACAGAGGTGAAGGGAAAAAAAGATAAAGAAATTAAGGAGGTTGAGAGGGCTTGTGTGTCG
ATGCTTGGTGAGGCGGGACGTAACGGTTTTTTGTCTGTAGGCACTTCTACCCCACAGGGC
CATGAATCTGGCCCGAAACCGTTGCGAGCGTGCCAATTGGTGGTGATATCTTTTTTCTTC
CCTTTTTTTTTGTTTTCCGTTCTGTTATGTTCCTTCATCTTGAATTCACTAAAGGGAACA
GAAGAAAAAGTTGGATATTAGATAAGCGGTACTTTTCTACAGGTCTAGTATTATTCCTCG
GTTGGAACAAGAAATAGTGCTTCAGTAGCTCAGTAGGAAGAGCGTCAGTCTCATAATCTG
AAGGTCGAGAGTTCGAACCTCCCCTGGAGCATATTTTTATACGTATATCTTTTTTCCCTC
TATTTTGTTTTTTTTTTCTTTGTTTTTTCGTAGCTAGTAAAGAAGAGAAGGAGACCTAAA
GTGTATATATACTTAATCTGCGATCATTGAAAAGTCGCTAGCTTATTGTCACTTACTGCA
TTTTCACAACATCTTCCATTTTTGTTTTCTCAGAAGGACA
Chr coordinates Chr X from 390853-388385
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