Yeastract
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YEASTRACT+ INESC-ID IST IBB
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Locus Information

Standard Name SSL2
Systematic Name YIL143C
Alias LOM3, RAD25
Strain S288c
Description Component of RNA polymerase transcription factor TFIIH holoenzyme; acts as dsDNA-dependent translocase in context of TFIIH, unwinds DNA strands during initiation and promotes transcription start site (TSS) scanning; has DNA-dependent ATPase/helicase activity; interacts functionally with TFIIB, has roles in TSS selection and gene looping to juxtapose initiation and termination regions; involved in DNA repair; relocalizes to cytosol under hypoxia; homolog of human ERCC3
External sources Open in SGD external link
Open in KEGG external link
Gene Sequence
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>SSL2 YIL143C
ATGACGGACGTTGAAGGCTACCAACCTAAGAGCAAGGGGAAAATCTTTCCAGATATGGGT
GAGTCCTTTTTCTCATCAGATGAGGATTCACCAGCTACTGATGCAGAGATCGATGAGAAC
TATGATGATAACAGGGAAACGTCAGAAGGACGTGGAGAAAGGGATACCGGCGCCATGGTA
ACAGGGTTGAAGAAGCCTCGGAAAAAGACCAAGAGTAGCAGGCATACAGCGGCGGATTCC
TCTATGAATCAAATGGACGCTAAGGATAAAGCGCTTTTGCAGGACACTAATAGCGATATA
CCAGCAGATTTCGTTCCAGATTCCGTCTCTGGAATGTTCAGAAGCCATGACTTTAGTTAT
TTGCGGTTAAGACCAGACCATGCTTCCAGGCCCCTTTGGATCTCGCCAAGTGACGGTAGG
ATCATTCTGGAGAGTTTCTCTCCATTAGCAGAACAGGCTCAGGACTTTCTGGTCACCATT
GCAGAGCCTATAAGTAGACCCTCCCATATTCATGAATACAAGATCACAGCATACTCTTTG
TATGCAGCTGTTTCTGTAGGGTTGGAGACGGATGATATCATTTCAGTTCTGGATAGATTA
TCCAAAGTACCCGTTGCTGAATCGATAATCAACTTCATTAAAGGGGCTACCATTTCATAC
GGTAAAGTGAAACTAGTTATTAAGCATAATAGATATTTCGTGGAGACTACACAAGCAGAT
ATTCTGCAAATGTTGCTGAATGATTCCGTCATCGGGCCCCTAAGAATAGATAGCGATCAT
CAAGTACAGCCACCAGAGGATGTACTACAGCAACAACTTCAGCAAACCGCTGGAAAACCC
GCTACTAATGTTAATCCGAACGATGTGGAAGCCGTGTTTAGTGCAGTTATAGGTGGTGAT
AATGAGCGGGAAGAAGAAGATGATGATATTGATGCCGTTCACTCCTTTGAAATTGCCAAT
GAGTCTGTTGAAGTCGTAAAGAAAAGATGTCAAGAAATCGATTATCCCGTGTTGGAAGAA
TACGACTTTAGAAACGACCATAGAAACCCGGATTTAGATATTGATTTGAAACCTTCCACT
CAAATCAGACCCTATCAAGAAAAATCGCTGAGTAAAATGTTTGGTAATGGGCGTGCTCGT
TCAGGGATTATTGTTTTGCCATGTGGCGCAGGTAAAACTTTGGTCGGTATTACCGCAGCA
TGTACTATAAAAAAATCCGTAATTGTTTTATGTACTTCATCAGTCTCCGTCATGCAATGG
AGGCAGCAATTTTTACAATGGTGTACCTTACAACCTGAAAATTGTGCTGTTTTCACCTCT
GATAATAAGGAAATGTTCCAGACAGAATCCGGTTTGGTTGTTTCCACTTATTCAATGGTG
GCAAACACAAGAAACAGGTCTCATGATTCACAAAAAGTTATGGATTTCTTGACCGGTAGG
GAATGGGGGTTCATTATTCTTGACGAAGTTCATGTGGTGCCCGCCGCAATGTTCCGTAGG
GTGGTCTCCACCATCGCAGCACACGCCAAATTGGGACTGACCGCAACGCTGGTTAGAGAA
GATGATAAAATTGGTGATCTGAATTTTTTAATTGGTCCAAAACTTTATGAAGCAAATTGG
ATGGAATTATCCCAAAAAGGACATATTGCAAATGTCCAATGTGCAGAGGTTTGGTGTCCC
ATGACAGCAGAATTTTACCAAGAGTATTTAAGAGAAACTGCAAGGAAAAGAATGCTACTG
TATATCATGAATCCAACAAAGTTTCAGGCATGCCAATTCTTAATTCAATATCACGAAAGG
AGGGGTGATAAGATCATCGTTTTTTCAGATAATGTTTACGCCTTACAAGAATATGCTTTG
AAAATGGGAAAACCATTTATTTATGGTTCCACACCACAACAAGAGCGTATGAACATTCTG
CAAAATTTCCAGTACAATGACCAAATCAATACCATATTTCTATCAAAAGTTGGTGATACT
TCCATCGATTTACCAGAAGCTACCTGTTTAATTCAAATATCTTCGCACTATGGGTCTCGT
CGTCAAGAAGCCCAAAGATTAGGAAGAATTTTAAGAGCTAAAAGACGTAATGACGAAGGT
TTCAATGCGTTCTTTTATTCTCTGGTTTCTAAGGATACGCAAGAAATGTACTACTCAACA
AAGAGACAAGCGTTTTTGGTAGATCAAGGTTACGCATTCAAAGTCATTACACATTTACAC
GGAATGGAGAACATTCCAAATTTGGCATATGCTTCACCCAGAGAACGTAGAGAGCTATTG
CAAGAAGTATTATTGAAGAACGAAGAAGCTGCTGGTATCGAGGTCGGTGATGACGCTGAC
AATTCTGTTGGGAGAGGTTCAAATGGCCACAAAAGATTTAAATCAAAGGCCGTTAGAGGT
GAAGGTTCATTGTCTGGTCTTGCTGGCGGTGAAGATATGGCATATATGGAATACAGTACC
AATAAAAACAAAGAACTGAAGGAACATCATCCATTAATCAGAAAGATGTATTATAAGAAT
TTGAAGAAGTGA
Promoter Sequence
Download FASTA
>SSL2 YIL143C
CCGAATATTTTGACCTTGTCTGTATCCAAAGTTGTATTGGCGATTAGAATCTTAGCATTT
TCAATTCTCTTGGGTTGGTTGTTACCAAATTTTTTGGCAAGAATGAAACCTTCGTCAAGG
AACGAATCTGATAGCTTTCCACCAAGAATCTTAATGATCTGAATATGTTCTAAGTTAGTG
GAGCCCTTCAATCTCAAAATAGCATTAGTTGCTAATTCTGCGAAGTGATCCTTATCCTGA
GACAAAATTTTGGAAGATAAAGTAGTCTTGGCAATATGGATCAGATCTTCACGGAACATG
GTCTTATCATGAGAGTTGTCAACAGCCGCTTTCGTTAACGCATCCAATGCGGCTGCTGAA
GCTAGTCGGTAACCTTCAATAATAGTTTGAGGGTGGATTTTGGATTGATCAATCAACTTC
TCTGCTTCTCTAAGCAACTCTGCGCTCAAAACAGTAACACTAGTGGTACCATCTCCAACT
TCGTCATCCTGCACCTTACTGATGTTCACCAACACTTTGGCTGCGGGATTATCCAGCGGA
ATTGACTTCAGAATCGTAGCACCATCGTTTGTTACCATGCAAGTGTTACTGGACGCACTT
TGCAATAATTTATCCATCCCTTTTGGGCCTAATGTGCTTTTCACCAAATCACCCACGGCA
ATGGCACCGACAAACGCCGACAAACGGGCGTTTTCCGCTCTTTCTTCTGTAACCTGGTCT
CCAAATATCTGTACACTCATCCTGAATCTTTTGAGCTTTGTACGACTGACTCTTCTTGCC
TATTTAATGGCCACCTTTCATCCTCTTTTTTATTGCTCTGCTCTTGTCTTTTAAACTCGC
CACCGCGAAGAGAAAAAAATTTCAGATCGTTAGAAACGAGGTTTTTCTTCTAAGAAGTAT
AAGGAAAAAGGTCCTTAGTAAGGATAGATAATAGTAATGATATCTACATTATTTAGTAAA
AGTAGCATCTACTGACGTTGGAATCAGTGGAAGATAAATC
Chr coordinates Chr IX from 83041-80510
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