S.cerevisiae - Yeastract

Locus Information

Standard Name	YHR214C-B
Systematic Name	YHR214C-B
Strain	S288c
Description	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes; YHR214C-B has a paralog, YAR070C, that arose from a segmental duplication
External sources	Open in SGD Open in KEGG

Gene Sequence Download FASTA Hide Seq	>YHR214C-B YHR214C-B ATGGAATCCCAACAATTATCTAATTACCCACATATATCTCATGGTAGCGCCTGTGCTTCG GTTACTTCTAAGGAAGTCCACACAAATCAAGATCCGTTAGACGTTTCAGCTTCCAAAATT CAAGAATATGATAAGGCTTCCACTAAGGCTAACTCTCAACAGACAACAACACCTGCTTCA TCAGCTGTTCCAGAGAACCTCCATCATGCCTCTCCTCAACCTGCTTCAGTACCACCTCCA CAGAATGGGCCGTACCCACAGCAGTGCATGATGACCCAAAACCAAGCCAATCCATCTGGT TGGTCATTTTACGGACACCCATCTATGATTCCGTATACACCTTATCAAATGTCGCCTATG TACTTTCCACCTGGGCCACAATCACAGTTTCCGCAGTATCCATCATCAGTTGGAACGCCT CTGAGCACTCCATCACCTGAGTCAGGTAATACATTTACTGATTCATCCTCAGCGGACTCT GATATGACATCCACTAAAAAATATGTCAGACCACCACCAATGTTAACCTCACCTAATGAC TTTCCAAATTGGGTTAAAACATACATCAAATTTTTACAAAACTCGAATCTCGGTGGTATT ATTCCGACAGTAAACGGAAAACCCGTACCACCAATGTTAACCTCACCTAATGACTTTCCA AATTGGGTTAAAACATACATCAAATTTTTACAAAACTCGAATCTCGGTGGTATTATTCCG ACAGTAAACGGAAAACCCGTACGTCAGATCACTGATGATGAACTCACCTTCTTGTATAAC ACTTTTCAAATATTTGCTCCCTCTCAATTCCTACCTACCTGGGTCAAAGACATCCTATCC GTTGATTATACGGATATCATGAAAATTCTTTCCAAAAGTATTGAAAAAATGCAATCTGAT ACCCAAGAGGCAAACGACATTGTGACCCTGGCAAATTTGCAATATAATGGCAGTACACCT GCAGATGCATTTGAAACAAAAGTCACAAACATTATCGACAGACTGAACAATAATGGCATT CATATCAATAACAAGGTCGCATGCCAATTAATTATGAGAGGTCTATCTGGCGAATATAAA TTTTTACGCTACACACGTCATCGACATCTAAATATGACAGTCGCTGAACTGTTCTTAGAT ATCCATGCTATTTATGAAGAACAACAGGGATCGAGAAACAGCAAACCTAATTACAGGAGA AATCCGAGTGATGAGAAGAATGATTCTCGCAGCTATACGAATACAACCAAACCCAAAGTT ATAGCTCGGAATCCTCAAAAAACAAATAATTCGAAATCGAAAACAGCCAGGGCTCACAAT GTATCCACATCTAATAACTCTCCCAGCACGGACAACGATTCCATCAGTAAATCAACTACT GAACCGATTCAATTGAACAATAAGCACGACCTTCATTTAGGCCAGAAACTTACTGAATCT ACAGTAAATCATACTAATCATTCTGATGATGAACTCCCTGGACACCTCCTTCTCGATTCA GGAGCATCACGAACCCTTATAAGATCTGCTCATCACATACACTCAGCATCATCTAATCCT GACATAAACGTAGTTGATGCTCAAAAAAGAAATATACCAATTAACGCTATTGGTGACCTA CAATTTCACTTCCAGGACAACACCAAAACATCAATAAAGGTATTGCACACTCCTAACATA GCCTATGACTTACTCAGTTTGAATGAATTGGCTGCAGTAGATATCACAGCATGCTTTACC AAAAACGTCTTAGAACGGTCTGACGGCACTGTACTTGCACCTATCGTAAAATATGGAGAC TTTTACTGGGTATCTAAAAAGTACTTGCTTCCATCAAATATCTCCGTACCCACCATCAAT AATGTCCATACAAGTGAAAGTACACGCAAATATCCTTATCCTTTCATTCATCGAATGCTT GCGCATGCCAATGCACAGACAATTCGATACTCACTTAAAAATAACACCATCACGTATTTT AACGAATCAGATGTCGACTGGTCTAGTGCTATTGACTATCAATGTCCTGATTGTTTAATC GGCAAAAGCACCAAACACAGACATATCAAAGGTTCACGACTAAAATACCAAAATTCATAC GAACCCTTTCAATACCTACATACTGACATATTTGGTCCAGTTCACAACCTACCAAAAAGT GCACCATCCTATTTCATCTCATTTACTGATGAGACAACAAAATTCCGTTGGGTTTATCCA TTACACGACCGTCGCGAGGACTCTATCCTCGATGTTTTTACTACGATACTAGCTTTTATT AAAAACCAGTTTCAGGCCAGTGTCTTGGTTATACAAATGGACCGTGGTTCTGAGTATACT AACAGAACTCTCCATAAATTCCTTGAAAAAAATGGTATAACTCCATGCTATACAACCACA GCGGATTCCCGAGCACATGGAGTCGCTGAACGGCTCAACCGTACCTTATTAGATGACTGC CGTACTCAACTGCAATGTAGTGGTTTACCGAACCATTTATGGTTCTCTGCAATCGAATTT TCTACTATTGTGAGAAATTCACTAGCTTCACCTAAAAGCAAAAAATCTGCAAGACAACAT GCTGGCTTGGCAGGACTTGATATCAGTACTTTGTTACCTTTCGGTCAACCTGTTATCGTC AATGATCACAACCCTAACTCCAAAATACATCCTCGTGGCATCCCAGGCTACGCTCTACAT CCGTCTCGAAACTCTTATGGATATATCATCTATCTTCCGTCCTTAAAGAAGACAGTAGAT ACAACTAACTATGTTATTCTTCAGGGCAAGGAATCCAGATTAGATCAATTCAATTACGAC GCACTCACTTTCGATGAAGACTTAAACCGTTTAACTGCTTCATATCATTCGTTCATTGCG TCAAATGAGATCCAACAATCCAATGATCTTAACATAGAATCTGACCATGACTTCCAATCT GACATTGAACTACATCCTGAGCAACTGAGAAATGTCCTTTCAAAAGCTGTGAGTCCAACC GATTCCACACCTCCGTCAACTCATACTGAAGATTCGAAACGTGTTTCCAAAACCAATATT CGCGCACCCAGAGAAGTTGACCCCAACATATCTGAATCTAATATTCTTCCATCTAAGAAG AGATCTAGCACCCCCCAAATTTCCGATATCGAGAGTACCGGTTCGGGTGGTATGCATAGA TTAGATGTTCCTTTACTTGCTCCCATGTCCCAATCTAACACACATGAGTCGTCGCACGCC AGTAAATCTAAAGATTTCAGACACTCAGACTCGTACAGTGACAATGAGACTAATCATACA AACGTACCAATATCCAGTACGGGTGGTACCAATAATAAAACTGTTCCGCAGACAAGCGAA CAGGAGACTGAGAAAAGGATCATACACCGTTCACCTTCGATCGATACTTCCTCATCAGAA AGTAATTCACTACACCACGTCGTTCCTATCAAAACGTCAGATACCTGTCCTAAGGAGAAT ACAGAGGAATCTATTATCGCTGATCTTCCACTCCCCGATCTGCCTCCAGAACCTCCTACC GAATTATCAGACTCCTTTAAAGAACTCCCACCGATAAATTCTCATCAAACTAATTCCAGT TTGGGTGGTATTGGTGACTCTAATGCCTATACTACTATCAACAGTAAGAAAAGATCATTA GAAGATAATGAAACTGAAATTAAGGTATCACGAGACACATGGAATACTAAGAATATGCGT AGTTTAGAACCTCCGAGATCGAAGAAACGAATTCACCTGATTGCAGCTGTAAAAGCAGTA AAATCAATCAAACCAATACGAACAACCTTACGATACGATGAGGCAATCACCTATAATAAA GATATTAAAGAAAAAGAAAAATATATCCAGGCATACCACAAAGAAGTCAATCAACTGTTG ATGATGAAAACTTGGGACACTGACAGATATTATGACAGAAAAGAAATAGACCCCAAAAGA GTAATAAATTCAATGTTTATCTTTAACAGGAAACGTGACGGTACTCATAAAGCTAGATTT GTTGCAAGAGGTGATATTCAACATCCTGACACTTACGACCCAGGCATGCAATCCAATACC GTACATCACTATGCATTAATGACATCCCTGTCACTTGCATTAGACAATAACTACTATATT ACACAATTAGACATATCTTCGGCATATTTGTATGCAGACATCAAAGAAGAACTATACATA AGACCTCCACCACATTTAGGAATGAATGATAAGTTGATACGTTTGAAGAAATCACTTTAT GGATTGAAACAAAGTGGAGCGAACTGGTACGAAACTATCAAATCATACCTGATAAAACAG TGTGGTATGGAAGAAGTTCGTGGATGGTCATGCGTATTTAAGAATAGTCAAGTAACAATT TGCTTATTCGTTGATGATATGATATTGTTCAGCAAAGACTTAAATGCAAATAAGAAAATC ATAACAACACTCAAGAAACAATACGATACAAAGATAATAAATCTGGGTGAAAGTGATAAC GAAATTCAGTACGACATACTTGGCTTAGAAATCAAATATCAAAGAGGTAAATACATGAAA TTAGGTATGGAAAACTCATTAACTGAGAAAATACCCAAATTAAACGTACCTTTGAATCCA AAAGGAAGAAAACTTAGCGCTCCAGGTCAACCAGGTCTTTATATAGACCAGGATGAACTA GAAATAGATGAAGATGAATACAAAGAGAAGGTACATGAAATGCAAAAGTTGATTGGTCTA GCTTCATATGTTGGATATAAATTTAGATTTGACTTACTATACTACATCAACACACTTGCT CAACATATACTATTCCCCTCTAGGCAAGTTTTAGACATGACATATGAGTTAATACAATTC ATGTGGGACACTAGAGATAAACAACTGATATGGCACAAAAACAAACCTACCGAGCCAGAT AATAAACTAGTCGCAATAAGTGATGCTTCATATGGTAACCAACCATATTACAAGTCACAA ATTGGCAACATATATTTACTTAATGGAAAGGTAATTGGAGGAAAGTCCACCAAGGCTTCA TTAACATGTACTTCAACTACGGAAGCAGAAATACACGCGATAAGTGAATCTGTCCCATTA TTAAATAACCTCAGTCACCTTGTGCAAGAACTTAACAAGAAACCAATTACTAAAGGATTA CTAACCGACAGTAAATCTACAATCAGTATAATTATATCCAATAATGAAGAGAAATTTAGA AACAGATTTTTTGGTACTAAAGCAATGAGACTAAGAGATGAAGTATCAGGAAATCATCTG CACGTATGCTATATCGAAACCAAAAAGAATATTGCAGACGTAATGACCAAACCTCTTCCG ATAAAAACATTCAAACTATTAACAAACAAATGGATTCATTAG
Promoter Sequence Download FASTA	>YHR214C-B YHR214C-B TTTGTATTCAATTGGTTTTCACTTTCTCGAAACGCAAGGCTTAAATAAATCAAGGACAGA TTCGATAGCTTCTTTTGGGACAGTCAGCTCTTCAGAGGTAATTGCATGACTTCATGATTC GCGGAATACGAAATGAAAAGGGAGGTCCGTTTGAGGTAACTCAGTTCTTTACGAATCACA TGCAATATTCAGGGTAAAAATCCAAGTTATCTAATTTTTTTTAAACTACCTTTTTCTTTT GTACATCACGTTTCACTATATATTCTACTACATCTATTTTCGGCCCAAAACTACAGCATT TGCAGAAACAAAACGACGCTTTCTGTTCCTGCTGATAGTATTCATGACACATTCCATATT GCATGTTGCATTTAAAACGAAGGGCCAAGCCATGGTCATGTGATTTCCATGTGCGGCAAC TTCAAGACTTCTTCTTTTGGGCATAGGAAGACATTAAAAATATTATTTATGCATTATTCT TATGTCGGCTAATAGATTCAAAGAAACCCACGAAAAATTTACCGACCGCGAGAAATAAAA GTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAATGTGTCTATC TTCATAATGGTGCCTTCGCTAAACCATCTTTTCTGACGCTTTATAGTTCGAACACAGCAT TCTTCAACCGCGTAAAGTTAAAATCACTTGAATGTTTACACTGACGTTTTGTTGGAATAA AAATCCACTATCGTCTATCAACTAATAGTTATATTATCAATATATTATCATATACGGTGT TAAGATGATGACATAAGTTATGAGAAGCTGTCATCGAGGTTAGAGGAAGCTGAAGTGCAA GGATTGATAATGTAATAGGATAATGAAACATATAAAACGGAATGAGGAATAATCGTAATA TTAGTATGTAGAAATATAGATTCCATTTTGAGGATTCCTATATCCTCGAGGAGAACTTCT AGTATATTCTGTATATCTAATATTATAGCCTTTATCAACA
Chr coordinates	Chr VIII from 547929-543964,549346-547931