Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
YGR109W-B
Systematic Name
YGR109W-B
Strain
S288c
Description
Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA
Hide Seq
>YGR109W-B YGR109W-B
ATGAGCTTTATGGATCAAATCCCAGGAGGAGGAAATTATCCAAAACTCCCAGTAGAATGC
CTTCCTAACTTCCCGATCCAACCATCTTTGACCTTCAGAGGTAGAAATGACTCGCATAAA
CTGAAAAACTTTATCTCCGAAATAATGTTAAACATGTCTATGATATCTTGGCCGAATGAT
GCCAGTCGTATTGTGTACTGCAGAAGACATTTATTAAACCCCGCTGCTCAGTGGGCTAAT
GACTTTGTACAAGAACAAGGTATACTTGAAATAACATTCGACACATTCATACAAGGATTA
TATCAGCATTTCTATAAGCCACCAGATATCAATAAAATCTTTAATGCAATCACGCAACTT
TCCGAAGCTAAACTTGGTATTGAGCGTCTCAACCAACGATTCAGAAAGATTTGGGACAGA
ATGCCACCAGACTTCATGACCGAAAAAGCTGCCATAATGACATATACTAGGCTATTGACA
AAGGAAACCTATAATATTGTCAGAATGCACAAACCAGAGACATTAAAAGACGCCATGGAA
GAGGCTTACCAGACAACTGCACTAACTGAAAGATTCTTCCCAGGATTCGAACTTGATGCT
GATGGAGACACTATCATCGGTGCCACAACCCACTTACAAGAAGAATACGACTCTGACTAT
GATTCAGAAGATAATCTGACCCAGAATGGATACGTCCATACCGTAAGGACAAGAAGATCT
TACAATAAACCAATGTCAAATCATCGAAACAGGAGAAATAACAACCCATCTAGAGAAGAA
TGTATAAAAAATCGGCTATGCTTCTATTGTAAGAAAGAGGGACATCGCCTGAACGAATGT
AGAGCACGTAGGCGAGTTCTAACCGATCTTGAACTCGAATCAAAAGACCAACAAACTCCT
TTTATCAAAACCTTACCAATTGTACACTATATCGCCATCCCCGAGATGGACAATACCGCC
GAAAAAACCATAAAAATACAAAACACGAAAGTAAAAACCCTGTTTGACAGTGGATCACCC
ACGTCATTTATCCGAAGAGATATTGTAGAACTTCTCAAATACGAAATCTACGAGACCCCT
CCACTCCGTTTTAGAGGATTCGTAGCCACCAAATCCGCCGTTACATCCGAAGCAGTCACC
ATTGACCTCAAAATCAATGACCTGCATATAACTTTAGCCGCGTACATACTGGATAACATG
GACTACCAATTGTTAATTGGAAATCCAATCTTACGCCGCTACCCGAAAATCCTGCACACA
GTACTGAATACCAGAGAGAGCCCCGACTCCTTAAAGCCCAAGACTTATCGCTCCGAAACC
GTTAATAACGTTAGAACCTACTCCGCTGGTAATCGTGGTAACCCCAGAAACATAAAACTG
TCTTTTGCCCCCACCATTCTCGAAGCAACTGACCCGAAATCCGCTGGTAATCGTGGTGAC
TCCAGAACCAAAACCCTGTCTCTTGCAACCACTACTCCTGCAGCAATTGACCCGCTTACG
ACCCTTGATAACCCAGGTAGTACTCAAAGTACATTTGCGCAATTCCCGATACCTGAAGAA
GCGAGCATCCTAGAAGAGGATGGAAAATACTCCAACGTTGTCTCAACCATTCAGAGTGTA
GAACCTAATGCTACTGATCACAGCAATAAGGACACCTTTTGCACTTTGCCAGTTTGGTTA
CAACAGAAGTATAGAGAGATCATACGTAATGATCTCCCACCAAGACCTGCCGACATTAAT
AACATCCCCGTAAAACATGATATTGAAATTAAACCTGGCGCAAGACTACCTCGACTACAG
CCATACCATGTTACAGAAAAGAACGAACAAGAAATCAACAAAATAGTTCAAAAACTGCTC
GATAACAAGTTCATTGTTCCCTCAAAGTCGCCTTGCAGCTCCCCTGTAGTCCTCGTCCCG
AAGAAAGACGGTACCTTCCGACTCTGCGTCGATTACCGCACCCTGAACAAAGCTACCATC
TCCGACCCATTCCCATTACCCAGAATCGACAACCTATTGAGCCGTATTGGAAATGCCCAG
ATATTTACCACGCTAGATTTGCATAGTGGTTACCACCAGATCCCGATGGAACCCAAAGAC
CGCTACAAAACCGCCTTTGTCACACCATCCGGTAAGTATGAATATACCGTCATGCCATTT
GGCTTAGTCAATGCACCTAGTACATTCGCAAGATACATGGCTGATACATTTAGAGACCTG
AGATTCGTCAATGTTTACCTTGATGATATATTAATATTCTCCGAATCTCCAGAAGAACAT
TGGAAACATTTAGACACGGTACTAGAAAGATTAAAGAACGAGAACCTCATTGTTAAGAAG
AAAAAATGTAAATTTGCATCTGAAGAAACTGAGTTTTTAGGCTATAGTATTGGAATCCAG
AAAATAGCTCCACTACAGCACAAATGTGCAGCAATCCGAGACTTTCCGACGCCTAAAACA
GTAAAACAAGCACAGAGATTTTTAGGAATGATTAATTACTACAGACGATTCATTCCAAAT
TGCTCCAAGATTGCACAGCCAATCCAACTGTTTATTTGTGACAAAAGTCAATGGACAGAA
AAACAAGACAAGGCAATTGATAAACTAAAAGACGCCTTGTGTAACTCCCCCGTCCTAGTA
CCATTCAACAACAAAGCAAACTACCGACTTACAACAGACGCCTCAAAAGACGGCATTGGT
GCTGTTCTAGAAGAAGTCGACAACAAGAACAAACTTGTTGGTGTCGTCGGTTACTTCTCT
AAATCCTTAGAGAGTGCCCAGAAAAACTATCCTGCTGGCGAATTAGAACTACTTGGAATT
ATCAAAGCACTCCACCACTTCCGATATATGCTTCACGGAAAGCATTTCACGTTAAGAACA
GACCACATTAGTTTGTTATCATTACAAAACAAGAACGAACCCGCACGACGCGTGCAACGC
TGGTTAGATGACCTAGCCACATATGACTTCACCTTAGAATACCTAGCTGGACCCAAGAAC
GTTGTCGCAGATGCCATATCCCGTGCCGTATATACTATAACCCCCGAAACATCCCGACCT
ATCGACACAGAAAGCTGGAAATCTTACTACAAATCAGACCCATTATGTAGTGCTGTCTTA
ATTCATATGAAAGAATTGACACAACACAACGTCACACCTGAAGATATGTCAGCCTTCCGT
AGTTACCAGAAGAAACTCGAACTATCAGAGACCTTCCGAAAGAATTATTCCCTAGAAGAC
GAAATGATCTATTACCAAGACCGACTAGTAGTACCAATAAAACAACAGAACGCAGTTATG
AGACTATATCATGACCATACCTTATTTGGAGGACATTTTGGTGTAACAGTGACCCTTGCG
AAAATCAGCCCAATTTACTATTGGCCAAAATTACAACATTCGATCATACAATACATCAGG
ACCTGCGTACAATGTCAACTAATAAAATCACACCGACCACGCTTACATGGACTATTACAA
CCACTCCCTATAGCAGAAGGAAGATGGCTTGATATATCAATGGATTTTGTGACAGGATTA
CCCCCGACATCAAATAACTTGAATATGATCCTCGTCGTAGTTGATCGTTTTTCGAAACGC
GCTCACTTCATAGCTACAAGGAAAACCTTAGACGCAACACAACTAATAGATCTACTCTTT
CGATACATTTTTTCATATCATGGTTTTCCCAGGACAATAACCAGTGATAGAGATGTCCGT
ATGACCGCCGACAAATATCAAGAACTCACGAAAAGACTAGGAATAAAATCGACAATGTCT
TCCGCGAACCACCCCCAAACAGATGGACAATCCGAACGAACGATACAGACATTAAACAGG
TTACTAAGAGCCTATGCTTCAACCAATATTCAGAATTGGCATGTATATTTACCACAAATC
GAATTTGTTTACAATTCTACACCTACTAGAACACTTGGAAAATCACCATTTGAAATTGAT
TTAGGATATTTACCGAATACCCCTGCTATTAAGTCAGATGACGAAGTCAACGCAAGAAGT
TTTACTGCCGTAGAACTTGCCAAACACCTCAAAGCCCTTACCATCCAAACGAAGGAACAG
CTAGAACACGCTCAAATCGAAATGGAAACTAATAACAATCAAAGACGTAAACCCTTATTG
TTAAACATAGGAGATCACGTATTAGTGCATAGAGATGCATACTTCAAGAAAGGTGCTTAT
ATGAAAGTACAACAAATATACGTCGGACCATTTCGAGTTGTCAAGAAAATAAACGATAAC
GCCTACGAACTAGATTTAAACTCTCACAAGAAAAAGCACAGAGTTATTAATGTACAATTC
CTGAAAAAGTTTGTATACCGTCCAGACGCGTACCCAAAGAATAAACCAATCAGCTCCACT
GAAAGAATTAAGAGAGCACACGAAGTTACTGCACTCATAGGAATAGATACTACACACAAA
ACTTACTTATGTCACATGCAAGATGTAGACCCAACACTTTCAGTAGAATACTCAGAAGCT
GAATTTTGCCAAATTCCCGAAAGAACACGAAGATCAATATTAGCCAACTTTAGACAACTC
TACGAAACACAAGACAACCCTGAGAGAGAGGAAGATGTTGTATCTCAAAATGAGATATGT
CAGTATGACAATACGTCACCCTGA
Promoter Sequence
Download FASTA
>YGR109W-B YGR109W-B
AAAGATAAAAGTCACTTGTATGAAATGAAGCAGTTATATATATGTTAATAAGAAAAAGGC
AAAAACTTAACCCTAGCAAAAAAGGTAATCAATGTGCTAAAACGGTAAATATTTAAACGC
AGGTTGCGAATTGCCAATTGCCAATTGTAGGATACACAGGGAGAGTAGAAACAACCAAGT
CCTGTGTCCTGTGGTAGACCCACTTGTTTTACCGCAGAGGGCCCTTTTTTTGTTTACCGT
CGCAAAAAAAAAACGCGAAGAATACGCGTTGGTCGTTAAATTTTGTGGTACGCGTAAAAC
TGCTATTTGGTATCCTCTTTAGGGACGCGCCCATTGTCTATACGGTAATATAGGGCTTTC
TTCATTACCTGCTTGCGTCAATTAGCTTTACTCATGTAACACATAATAACCTCTTACATT
GTAATGAGGCCCAAAAAAAAAAAAAGAACATCTTCAAAAAAAAAAAACTTTCATGGAAGG
ACCACCTAGTTAATAAAAAGCTCGCACTCAGGATCGAACTAAGGACCAACAGATTTGCAA
TCTGCTGCGCTACCACTGCGCCATACGAGCTTGATTTTCTGAAAGTGTTGTATCTCAAAA
TGAGATATGTCAGTATGACAATACGTCACCCTGAACGTTCATAAAACACATATGAAACAA
CCTTATAACAAAACGAACAACATGAGACAAAACCCGACCTTCCCTAGCTGAACTACCCAA
AGTATAAATGCCTGAACAATTAGTTTAGATCCGAGATTCCGCGCTTCCACCACTTAGTAT
GATTCATATTTTATATAATATATAAGATAAGTAACATTCCGTGAATTAATCTGATAAACT
GTTTTGACAACTGGTTACTTCCCTAAGACTGTTTATATTAGGATTGTCAAGACACTCCGG
TATTACTCGAGCCCGTAATACAACACCTGGTAGCGTTAAAGGTTACTAATTGTTCAAACG
AACCATCGAAAAGCCGAACCTAGCTACACCACACCCCAGT
Chr coordinates
Chr VII from 707610-708459,708461-712254