Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
YER160C Systematic Name
YER160C Strain
S288c Description
Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>YER160C YER160C
ATGGAATCCCAACAATTATCTAATTACCCACATATATCTCATGGTAGCGCCTGTGCTTCG
GTTACTTCTAAGGAAGTCCACACAAATCAAGATCCGTTAGACGTTTCAGCTTCCAAAATT
CAAGAATATGATAAGGCTTCCACTAAGGCTAACTCTCAACAGACAACAACACCTGCTTCA
TCAGCTGTTCCAGAGAACCCCCATCATGCCTCTCCTCAACCTGCTTCAGTACCACCTCCA
CAGAATGGGCCGTACCCACAGCAGTGCATGATGACCCAAAACCAAGCCAATCCATCTGGT
TGGTCATTTTACGGACACCCATCTATGATTCCGTATACACCTTATCAAATGTCGCCTATG
TACTTTCCACCTGGGCCACAATCACAGTTTCCGCAGTATCCATCATCAGTTGGAACGCCT
CTGAGCACTCCATCACCTGAGTCAGGTAATACATTTACTGATTCATCCTCAGCGGACTCT
GATATGACATCCACTAAAAAATATGTCAGACCACCACCAATGTTAACCTCACCTAATGAT
TTTCCAAATTGGGTTAAAACATACATCAAATTTTTACAAAACTCGAATCTCGGTGGTATT
ATTCCGACAGTAAACGGAAAACCCGTACGTCAGATCACTGATGATGAACTCACCTTCTTG
TATAACACTTTTCAAATATTTGCTCCCTCTCAATTCCTACCTACCTGGGTCAAAGACATC
CTATCCGTTGATTATACGGATATCATGAAAATTCTTTCCAAAAGTATTGAAAAAATGCAA
TCTGATACCCAAGAGGCAAACGACATTGTGACCCTGGCAAATTTGCAATATAATGGCAGT
ACACCTGCAGATGCATTTGAAACAAAAGTCACAAACATTATCGACAGACTGAACAATAAT
GGCATTCATATCAATAACAAGGTCGCATGCCAATTAATTATGAGAGGTCTATCTGGCGAA
TATAAATTTTTACGCTACACACGTCATCGACATCTAAATATGACAGTCGCTGAACTGTTC
TTAGATATCCATGCTATTTATGAAGAACAACAGGGATCGAGAAACAGCAAACCTAATTAC
AGGAGAAATCCGAGTGATGAGAAGAATGATTCTCGCAGCTATACGAATACAACCAAACCC
AAAGTTATAGCTCGGAATCCTCAAAAAACAAATAATTCGAAATCGAAAACAGCCAGGGCT
CACAATGTATCCACATCTAATAACTCTCCCAGCACGGACAACGATTCCATCAGTAAATCA
ACTACTGAACCGATTCAATTGAACAATAAGCACGACCTTCATTTAGGCCAGAAACTTACT
GAATCTACAGTAAATCATACTAATCATTCTGATGATGAACTCCCTGGACACCTCCTTCTC
GATTCAGGAGCATCACGAACCCTTATAAGATCTGCTCATCACATACACTCAGCATCATCT
AATCCTGACATAAACGTAGTTGATGCTCAAAAAAGAAATATACCAATTAACGCTATTGGT
GACCTACAATTTCACTTCCAGGACAACACCAAAACATCAATAAAGGTATTGCACACTCCT
AACATAGCCTATGACTTACTCAGTTTGAATGAATTGGCTGCAGTAGATATCACAGCATGC
TTTACCAAAAACGTCTTAGAACGGTCTGACGGCACTGTACTTGCACCTATCGTAAAATAT
GGAGACTTTTACTGGGTATCTAAAAAGTACTTGCTTCCATCAAATATCTCCGTACCCACC
ATCAATAATGTCCATACAAGTGAAAGTACACGCAAATATCCTTATCCTTTCATTCATCGA
ATGCTTGCACATGCCAATGCACAGACAATTCGATACTCACTTAAAAATAACACCATCACG
TATTTTAACGAATCAGATGTCGACTGGTCTAGTGCTATTGACTATCAATGTCCTGATTGT
TTAATCGGCAAAAGCACCAAACACAGACATATCAAAGGTTCACGACTAAAATACCAAAAT
TCATACGAACCCTTTCAATACCTACATACTGACATATTTGGTCCAGTTCACAACCTACCA
AAAAGTGCACCATCCTATTTCATCTCATTTACTGATGAGACAACAAAATTCCGTTGGGTT
TATCCATTACACGACCGTCGCGAGGACTCTATCCTCGATGTTTTTACTACGATACTAGCT
TTTATTAAAAACCAGTTTCAGGCCAGTGTCTTGGTTATACAAATGGACCGTGGTTCTGAG
TATACTAACAGAACTCTCCATAAATTCCTTGAAAAAAATGGTATAACTCCATGCTATACA
ACCACAGCGGATTCCCGAGCACATGGAGTCGCTGAACGGCTCAACCGTACCTTATTAGAT
GACTGCCGTACTCAACTGCAATGTAGTGGTTTACCGAACCATTTATGGTTCTCTGCAATC
GAATTTTCTACTATTGTGAGAAATTCACTAGCTTCACCTAAAAGCAAAAAATCTGCAAGA
CAACATGCTGGCTTGGCAGGACTTGATATCAGTACTTTGTTACCTTTCGGTCAACCTGTT
ATCGTCAATGATCACAACCCTAACTCCAAAATACATCCTCGTGGCATCCCAGGCTACGCT
CTACATCCGTCTCGAAACTCTTATGGATATATCATCTATCTTCCGTCCTTAAAGAAGACA
GTAGATACAACTAACTATGTTATTCTTCAGGGCAAGGAATCCAGATTAGATCAATTCAAT
TACGACGCACTCACTTTCGATGAAGACTTAAACCGTTTAACTGCTTCATATCATTCGTTC
ATTGCGTCAAATGAGATCCAACAATCCAATGATCTTAACATAGAATCTGACCATGACTTC
CAATCTGACATTGAACTACATCCTGAGCAACTGAGAAATGTCCTTTCAAAAGCTGTGAGT
CCAACCGATTCCACACCTCCGTCAACTCATACTGAAGATTCGAAACGTGTTTCCAAAACC
AATATTCGCGCACCCAGAGAAGTTGACCCCAACATATCTGAATCTAATATTCTTCCATCT
AAGAAGAGATCTAGCACCCCCCAAATTTCCGATATCGAGAGTACCGGTTCGGGTGGTATG
CATAGATTAGATGTTCCTTTACTTGCTCCCATGTCCCAATCTAACACACATGAGTCGTCG
CACGCCAGTAAATCTAAAGATTTCAGACACTCAGACTCGTACAGTGACAATGAGACTAAT
CATACAAACGTACCAATATCCAGTACGGGTGGTACCAATAATAAAACTGTTCCGCAGACA
AGCGAACAGGAGACTGAGAAAAGGATCATACACCGTTCACCTTCGATCGATACTTCCTCA
TCAGAAAGTAATTCACTACACCACGTCGTTCCTATCAAAACGTCAGATACCTGTCCTAAG
GAGAATACAGAGGAATCTATTATCGCTGATCTTCCACTCCCCGATCTGCCTCCAGAACCT
CCTACCGAATTATCAGACTCCTTTAAAGAACTCCCACCGATAAATTCTCATCAAACTAAT
TCCAGTTTGGGTGGTATTGGTGACTCTAATGCCTATACTACTATCAACAGTAAGAAAAGA
TCATTAGAAGATAATGAAACTGAAATTAAGGTATCACGAGACACATGGAATACTAAGAAT
ATGCGTAGTTTAGAACCTCCGAGATCGAAGAAACGAATTCACCTGATTGCAGCTGTAAAA
GCAGTAAAATCAATCAAACCAATACGAACAACCTTACGATACGATGAGGCAATCACCTAT
AATAAAGATATTAAAGAAAAAGAAAAATATATCCAGGCATACCACAAAGAAGTCAATCAA
CTGTTGAAGATGAAAACTTGGGACACTGACAGATATTATGACAGAAAAGAAATAGACCCC
AAAAGAGTAATAAATTCAATGTTTATCTTTAACAGGAAACGTGACGGTACTCATAAAGCT
AGATTTGTTGCAAGAGGTGATATTCAACATCCTGACACTTACGACCCAGGCATGCAATCC
AATACCGTACATCACTATGCATTAATGACATCCCTGTCACTTGCATTAGACAATAACTAC
TATATTACACAATTAGACATATCTTCGGCATATTTGTATGCAGACATCAAAGAAGAACTA
TACATAAGACCTCCACCACATTTAGGAATGAATGATAAGTTAATACGTTTGAAGAAATCA
CTTTATGGATTGAAACAAAGTGGAGCGAACTGGTACGAAACTATCAAATCATACCTGATA
AAACAGTGTGGTATGGAAGAAGTTCGTGGATGGTCATGCGTATTTAAGAATAGTCAAGTA
ACAATTTGCTTATTCGTTGATGATATGATATTGTTCAGCAAAGACTTAAATGCAAATAAG
AAAATCATAACAACACTCAAGAAACAATACGATACAAAGATAATAAATCTGGGTGAAAGT
GATAACGAAATTCAGTACGACATACTTGGCTTAGAAATCAAATATCAAAGAGGTAAATAC
ATGAAATTAGGTATGGAAAACTCATTAACTGAAAAAATACCCAAACTAAACGTACCTTTG
AACCCAAAAGGAAGGAAACTTAGCGCTCCAGGTCAACCAGGTCTATATATAGACCAGCAA
GAACTAGAGCTAGAAGAAGATGATTACAAAATGAAGGTACATGAAATGCAAAAGCTGATA
GGTCTAGCATCATATGTTGGATATAAATTTAGATTTGACCTATTATACTACATCAACACA
CTTGCACAACATATACTATTTCCGTCCAAGCAAGTGTTAGATATGACATATGAATTGATA
CAGTTCATATGGAATACGAGAGATAAGCAATTAATATGGCACAAAAGCAAACCTGTTAAG
CCAACAAATAAATTAGTTGTTATAAGCGATGCATCGTATGGTAACCAACCGTATTATAAA
TCACAAATTGGCAACATATATTTACTTAATGGAAAAGTAATTGGAGGAAAGTCCACCAAG
GCTTCATTAACATGTACTTCAACTACGGAAGCAGAAATACACGCGATAAGTGAATCTGTC
CCATTATTAAATAACCTCAGTCACCTTGTGCAAGAACTTAACAAGAAACCAATTACTAAA
GGATTACTAACCGACAGTAAATCTACAATCAGTATAATTATATCCAATAATGAAGAGAAA
TTTAGAAACAGATTTTTTGGTACTAAAGCAATGAGACTAAGAGATGAAGTATCAGGAAAT
CATCTGCACGTATGCTATATCGAAACCAAAAAGAATATTGCAGACGTAATGACCAAACCT
CTTCCGATAAAAACATTCAAACTATTAACAAACAAATGGATTCATTAG Promoter Sequence
Download FASTA
>YER160C YER160C
CTATAAACTTTACTATGTAAAAATAAAAATGAACCTTCACTATTCTTTCAAGACGGACTG
AAAATTTAAAGACTTGGTTGTTGCAGTTGATCGATTATACAAGACTAACAATTCCAGTAT
CATTTTTGCCTTAATTTGAGACCTTTTTCAACAAGATTCGCGGCAACGTAGTTGTATTTT
TTTTTTTCCACAACCCGTTTCCTTACAAAAGCATTCGGAAACTAAACATAAATATGGACC
AGCTTTACAAGAGCTATGGTATGTTCATATTATTAGGATATATTAGGTGAGATATTAAAA
AATGAAACAAATTGTGTCACCAGTTAGATAGGATTCAAGTAGTCATTAAAATAGAAACAA
GCGTTTAGGGTATGCGTTAAAAGAAACTCTAGCAACCTCCAATTGCCAGTGAAAAACTTC
CCGAGAAATACTACAACGACAGTGATACATCATACACTTAATAACACTGTAAGGTCCTCA
GTTTTTCCAGGTGGAAGGATCAAATACATACCCTTAATCAATATAAGTAAGTCGAAGGAA
GAGATTCGAGCAATGCATTAAAATATGATATTTCAACACATTGACTAAAACGGTTGTATA
TTCTTAGCCCACTGTGTTGTATCTCAAAATGAGATACGTCAGTATGACAATACGTCATCC
TAAACGTTCATAAAACACATATGAAACAACCTTATAACAAAACTGTTGGAATAAAAATCC
ACTATCGTCTATCAACTAATAGTTATATTATCAATATATTATCATATACGGTGTTAAGAT
GATGACATAAGTTATGAGAAGCTGTCATCGATGTTAGAGGAAGCTGAAACGCAAGGATTG
ATAATGTAATAGGATCAATGAATATAAACATATAAAACGGAATGAGGAATAATCGTAATA
TTAGTATGTAGAAATATAGATCCCATTTTGAGGATTCCTATATCCTCGAGGAGAACTTCT
AGTATATTCTGTATACCTAATATTATAGCCTTTATCAACA
Chr coordinates
Chr V from 496821-492856,498124-496823
