Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
YDR034C-D Systematic Name
YDR034C-D Strain
S288c Description
Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>YDR034C-D YDR034C-D
ATGGAATCCCAACAATTATCTCAAAATTCACCCAATCTTCATGGTAGCGCCTATGCTTCG
GTTACTTCTAAGGAAGTCCCATCAAATCAAGATCCGTTAGCCGTTTCAGCTTCCAATTTA
CCGGAATTTGATAGAGATTCCACTAAGGTTAATTCTCAACAAGAGACAACACCTGGGACA
TCAGCTGTTCCAGAGAACCATCATCATGTCTCTCCTCAACCTGCTTCAGTACCACCTCCA
CAGAATGGACAGTACCAACAGCACGGCATGATGACCCCAAACAAAGCTATGGCCTCTAAC
TGGGCACATTACCAACAACCATCTATGATGACGTGTTCACATTATCAAACGTCACCTGCG
TATTATCAACCGGACCCACACTATCCGTTGCCACAGTATATCCCACCACTGAGTACTTCC
TCACCTGATCCAATCGATTTAAAAAATCAACACTCTGAAATACCTCAAGCTAAGACAAAG
GTGGGAAATAACGTCTTACCACCACACACTTTAACATCAGAAGAAAACTTTTCTACATGG
GTTAAATTTTACATCAGATTTTTGAAGAACTCTAATCTCGGTGACATCATTCCAAATGAC
CAGGGTGAAATCAAAAGACAAATGACTTATGAAGAACATGCGTATATATACAATACCTTC
CAAGCATTTGCCCCATTTCATTTATTGCCAACATGGGTAAAACAAATTTTAGAAATTAAT
TATGCTGACATCCTTACAGTCCTTTGTAAAAGTGTGTCCAAAATGCAAACTAACAATCAA
GAATTAAAGGATTGGATAGCTCTTGCCAACCTTGAGTACGACGGAAGTACATCTGCTGAT
ACATTTGAAATTACAGTCAGTACGATCATTCAGAGGCTAAAAGAAAACAATATCAATGTT
AGCGACAGATTGGCCTGTCAACTAATACTTAAAGGTCTATCCGGTGACTTCAAATACCTA
CGTAATCAATATCGTACCAAAACGAACATGAAACTTTCCCAATTATTCGCTGAAATTCAA
TTAATATATGACGAAAATAAAATCATGAATCTAAATAAACCGTCCCAATACAAACAACAC
AGCGAATACAAAAATGTTTCTCGCACATCTCCAAACACGACTAACACAAAGGTTACAACT
CGTAATTATCAGAGAACAAATAGTTCAAAACCAAGAGCAGCAAAAGCTCACAATATTGCT
ACATCTAGTAAATTCTCAAGGGTGAACAATGATCACATTAATGAATCAACCGTTTCATCA
CAATACTTAAGCGATGACAACGAACTTAGTCTTGGCCAGCAACAGAAAGAATCTAAGCCA
ACACACACAATAGACTCGAATGACGAACTACCTGATCACCTTCTTATTGATTCAGGAGCT
TCGCAAACGCTTGTCAGATCAGCCCATTATTTACACCATGCAACACCCAATTCTGAAATA
AACATAGTCGATGCTCAAAAACAAGACATTCCTATAAATGCCATTGGTAATCTTCACTTC
AACTTTCAGAACGGCACCAAAACATCAATAAAAGCACTACACACACCAAACATAGCCTAT
GATCTATTAAGTTTGAGTGAGCTGGCTAATCAAAATATTACTGCCTGCTTTACCAGAAAC
ACTTTAGAAAGATCGGATGGTACAGTACTAGCTCCCATAGTCAAACATGGAGACTTTTAC
TGGTTATCTAAAAAATACCTAATTCCTTCGCACATTTCAAAGCTAACAATAAACAACGTC
AACAAAAGCAAAAGCGTAAATAAATATCCATATCCGTTAATACATCGAATGCTTGGACAT
GCTAACTTCCGAAGTATTCAGAAGTCTCTTAAGAAGAATGCAGTTACATATTTGAAGGAA
TCGGATATTGAATGGTCTAACGCTAGCACATATCAATGTCCTGACTGTCTAATCGGCAAA
AGCACGAAACATAGACATGTCAAAGGATCACGACTAAAGTACCAAGAATCATATGAGCCT
TTTCAGTACTTGCATACCGATATATTTGGTCCTGTACATCACTTACCGAAAAGTGCACCT
TCTTACTTTATATCGTTTACAGATGAGAAAACCAGATTCCAATGGGTGTACCCATTACAC
GACCGTCGTGAAGAATCTATCCTCAATGTTTTTACATCGATATTAGCATTTATTAAGAAC
CAATTCAATGCTCGCGTTCTAGTTATCCAGATGGATCGTGGCTCCGAGTACACTAACAAA
ACTCTTCATAAGTTCTTTACGAACAGAGGTATTACTGCATGCTATACAACCACGGCAGAT
TCTAGAGCACACGGTGTCGCTGAACGATTAAATCGTACTTTATTAAACGATTGTCGCACA
CTGCTTCATTGCAGTGGTCTACCAAATCATCTATGGTTCTCAGCAGTCGAATTTTCTACT
ATAATCAGAAATTCATTAGTCTCACCAAAAAACGATAAATCTGCAAGACAACATGCAGGT
TTAGCTGGACTGGACATTACTACTATACTACCTTTCGGTCAACCGGTTATAGTTAACAAC
CATAATCCCGACTCGAAAATACATCCTCGTGGCATTCCAGGTTACGCCTTACATCCGTCA
CGAAACTCTTATGGCTATATTATCTATCTTCCATCATTAAAAAAGACAGTAGATACTACC
AATTACGTTATATTACAAGACAAGCAATCCAAATTGGACCAATTCAATTATGATACACTC
ACCTTTGATGATGATCTCAATCGTTTAACAGCCCATAACCAATCTTTTATTGAAAAAAAT
GAAACAGAGCAGTCATATGATCAAAATACAGAATCTGATCATGACTATCAATCGGAGATT
GAAATAAACTCTGATCCTCTAGTGAACGACTTCTCGTCCCAATCAATAAACCCTTTACAA
TTAGACAAGGAACCAGTCCAAAAAGTACGTGCACCAAAAGAAGTTGATGCCGACATATCT
GAATACAATATTCTTCCATCTACTATACGATCTCGTACACCCCATATCATTAATAAAGAG
AGTACCGAAATGGGTGGTACCATTGAATCAGATACTACTTCACCTAGACACTCGTCTACC
TTCACTGCACGAAACCAAAAGCGACCTGGTAGTCCCAATGATATGATTGATTTGACCTCA
CAGGATAGAGTTAATTATGGACTTGAAAACATCAAAACTACACGTTTGGGTGGTACGGAG
GAACCATATATTCAACGAAATAGTGATACAAATATCAAATACAGGACTACAAATAGTACG
CCCTCAATAGATGACCGTTCGTCCAACAGTGAATCCACTACTCCCATCATCTCCATAGAA
ACAAAGGCTGCATGCGATAATACACCCTCCATTGATACGGATCCGCCAGAATATCGATCT
TCTGACCATGCGACTCCTAATATAATGCCTGACAAATCCTCAAAAAATGTTACGGCTGAT
TCTATTCTTGACGACCTCCCACTTCCTGACTTAACTAATAAATCTCCTACGGACACTTCT
GATGTTTCAAAAGATATTCCACACATACACTCTCGTCAGACTAATTCCAGTTTGGGTGGT
ATGGATGATTCTAATGTTCTGACTACTACCAAAAGTAAGAAAAGATCATTAGAAGATAAT
GAAACTGAAATTGAGGTATCCCGAGACACATGGAATAATAAGAATATGAGAAGTCTGGAA
CCACCAAGATCGAAGAAACGTATAAATCTAATTGCTGCAATAAAAGGAGTAAAATCAATC
AAACCAGTTCGAACGACCTTAAGATATGATGAAGCAATTACATATAATGAAGACAACAAA
GAAAAAGACAGATATATTGAAGCTTATCATAAAGAAATTAACCAACTATTGAGAATGAAC
ACTTGGGATACAAACAAATATTATGATAGAAATGACATAGATCCTAAGAAAGTAATAAAC
TCAATGTTTATATTTAACAAAAAACGTGATGGTACACACAAAGCTAGATTTGTTGCAAGA
GGCGACATTCAACACCCCGATACATATGATTCTGATATGCAATCCAATACCGTACATCAC
TATGCACTGATGACGTCATTGTCAATCGCATTAGACAATGACTATTATATCACACAGCTG
GACATATCCTCTGCTTACTTATATGCTGATATCAAAGAAGAATTATACATAAGACCTCCA
CCACATTTAGGTTTGAATGATAAGTTACTACGTTTGAGAAAATCACTCTATGGTTTGAAA
CAAAGTGGTGCAAACTGGTATGAAACCATTAAATCATATTTAATAAATTGTTGCGACATG
CAAGAAGTTCGCGGATGGTCATGCGTATTTAAGAATAGTCAAGTAACAATTTGCTTATTC
GTTGATGATATGATATTATTCAGCAAAGACTTAAATGCAAATAAGAAAATCATAACAACA
CTCAAGAAACAATACGATACAAAGATAATAAATCTGGGTGAAGGTGATAACGAAATTCAG
TACGACATACTTGGATTAGAGATCAAATATCAAAGAAGCAAGTACATGAAATTAGGTATG
GAAAAATCCTTGACAGAAAAATTACCCAAACTAAACGTACCTTTGAACCCAAAAGGAAAG
AAACTTAGAGCTCCAGGTCAACCAGGTCATTATATAGACCAGGATGAACTAGAAATAGAT
GAAGATGAATATAAAGAGAAAGTACATGAAATGCAAAAGTTGATTGGTCTAGCTTCATAT
GTTGGATATAAATTTAGATTTGACTTACTATACTACATCAACACACTTGCTCAACATATA
CTATTCCCCTCTAGGCAAGTTTTAGACATGACATATGAGTTAATACAATTCATGTGGGAC
ACTAGAGATAAACAATTAATATGGCACAAAAACAAACCTACCAAGCCAGATAATAAACTA
GTCGCAATAAGCGATGCTTCATATGGTAACCAACCATATTACAAGTCACAAATTGGTAAC
ATTTTCCTACTCAACGGAAAAGTGATTGGAGGAAAGTCGACAAAGGCTTCGTTAACATGC
ACTTCAACTACAGAAGCAGAAATACACGCAGTCAGTGAAGCTATACCGCTATTGAATAAC
CTCAGTCACCTTGTGCAAGAACTTAACAAGAAACCAATTATTAAAGGCTTACTTACTGAT
AGTAGATCAACGATCAGTATAATTAAGTCTACAAATGAAGAGAAATTTAGAAACAGATTT
TTTGGCACAAAGGCAATGAGACTTAGAGATGAAGTATCAGGTAATAATTTATACGTATAC
TACATCGAGACCAAGAAGAACATTGCTGATGTGATGACAAAACCTCTTCCGATAAAAACA
TTTAAACTATTAACTAACAAATGGATTCATTAG Promoter Sequence
Download FASTA
>YDR034C-D YDR034C-D
GGATAATGAAACATATAAAACGAAATGAGGAATAATCGTAACATTAGCATGTAGAAATAT
AGATTCCATTTTGAGGATTCCTAAATCCTCGATGAGAACTTCTAGTAAACCCTGTATACC
TAATATTATAGCCTTTATTAACAATGGAATTCCAACAATTATCACAAAATTCACAGAATT
TCCAGTTTAATATCAAGAATAGGTGGATAATACGGTAATCGTATGGCCGCCATTGTTATG
AAAGACAGTTATTCCTAAGTATATTGAATATACCAGGGTCACTATCGAGAATGTAGAATT
TCCCATAAGGAAAGCCATGAGTTCGTATAATATTATGATTGTCTCCTCTCTTCTTTTCTA
TATCATCATATGATTATTTCTATTGTGTTATTAGTTTTTACATTTCAGTCCTCAGTACTT
TTGTGAGAGGAGCTAAAAAAAAAAAAAAAAAAAAAAACATTACTTGGAAAAGGGAGGCAT
AGGAAAAAAAAAATGTCTAATATCGAAGATTGAGGAAAAAAATAAGTTATTGAAGGATGC
GAGGTTCGAACTCGCGCGGACAACCGTCCAACAGATCTTAAGTCTGCCGCCTTAGACCAC
TCGGCCAACCCTCCGTAAAATCACTTGCCTGTTTTCAGATTCTGTTCTTATTCGTTTAGG
TAAGAAAGAATATTCAAGGGAGGATGACTTTCGAAGATTGTATTTTTCTTGTTGGAATAA
AAATCAACTATCATCTACTAACTAGTATTTACGTTACTAGTATATTATCATATACGGTGT
TAGAAGATGACGCAAATGATGAGAAATAGTCATCTAAATTAGTGGAAGCTGAAACGCAAG
GATTGATAATGTAATAGGATCAATGAATATTAACATATAAAATGATGATAATAATATTTA
TAGAATTGTGTAGAATTGCAGATTCCCTTTTATGGATTCCTAAATCCTGGAGGAGAACTT
CTAGTATATCTACATACCTAATATTATTGCCTTATTAAAA
Chr coordinates
Chr IV from 518062-514043,519356-518064
