Index

1. Summary
2. Input
3. Output

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1. Summary

This utility searches for all described yeast transcription factor (TF) binding sites within a given nucleotide sequence.

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2. Input

The required input is one or more nucleotide sequences in Fasta format. The ambiguous bases in the input sequences will be disregarded while searching for the TF binding sites.

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3. Output

TF binding sites are searched in both the forward and the reverse strands of the input sequences. The binding sites found are displayed graphically and described in a table, containing information regarding the strand (forward/reverse), the transcription factor, its corresponding consensus sequence and the location in the input sequence.

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