YEASTRACT - Group Genes by TF

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DISCOVERER New

Regulatory Associations:
- Search for TFs
- Search for Genes
- Search for Associations

Group genes:
- Group by TF
- Group by GO

Pattern Matching:
- Search by DNA Motif
- Find TF Binding Site(s)
- Search Motifs on Motifs

Utilities:
- ORF List ⇔ Gene List
- IUPAC Code Generation
- Generate Regulation Matrix

Retrieve:
- TF-Consensus List
- Upstream Sequence
- Flat files

About Yeastract:
- Contact Us
- Cite YEASTRACT
- Acknowledgments
- Credits

Support & suggestions:

Group Genes by TF

Transcription Factors

Check for all TFs

ORFs/Genes

While grouping, consider:
Documented Regulations:
      Direct Evidence Codes
      Indirect Evidence Codes
      Undefined Evidence Codes
Potential Regulations

Calculate % of genes regulated by TF, relative to:
The total number of genes in the list
The number of genes regulated by the same TF